Acidithiobacillus caldus SM-1: Atc_2455
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Entry
Atc_2455 CDS
T01581
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acu
Acidithiobacillus caldus SM-1
Pathway
acu03030
DNA replication
acu03430
Mismatch repair
acu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Atc_2455
03430 Mismatch repair
Atc_2455
03440 Homologous recombination
Atc_2455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acu03032
]
Atc_2455
03400 DNA repair and recombination proteins [BR:
acu03400
]
Atc_2455
Enzymes [BR:
acu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Atc_2455
DNA replication proteins [BR:
acu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Atc_2455
DNA repair and recombination proteins [BR:
acu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Atc_2455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AEK59103
UniProt:
F9ZRT8
LinkDB
All DBs
Position
complement(2512249..2512980)
Genome browser
AA seq
243 aa
AA seq
DB search
MRQVVLDTETTGIDPRQGHRVIEIGAVELVDREITEGRYQQYLNPGRSSDPEALRVHGIR
DDFLADQPDFADIVEDFLAFLGDAELIIHNAPFDLAFLNAELERVGRPALQNPVRDTLVE
ARRRHPGQKNDLDALCRRYGVDNSRRQQHGALLDCEILAEVYLRMSGGQLGMRLAADREA
QGPSVAEEGQAGAPFQAHAQAADRRRPLRLRRADAAELAAHEAYLRGLGGKALWREESPG
EQT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagacaggtcgttctcgatacggaaaccacgggtatcgatccgcgccaagggcatcgg
gtcatcgagatcggtgccgtggaactcgtggaccgggagattaccgaggggcgctatcag
cagtatctcaatccagggcgtagcagcgacccggaagccttgcgtgtgcacggcatccgc
gatgactttctcgcggaccagcccgactttgccgacatcgtcgaggactttctggccttc
ctcggggatgctgagctgatcatccataacgcccccttcgatctcgcctttctcaatgcc
gaactggagcgtgtgggacgtccggcactgcaaaatcccgtgcgcgataccctggtggaa
gccaggcgtcggcacccaggccagaagaacgatctggacgcgctctgtcgccgctacggt
gtcgacaacagccgacgtcagcagcatggagcgctcctggactgcgagatcctggccgaa
gtctatctgcgcatgagcggtggccagctgggaatgcgcctggcggcagatcgtgaagcg
cagggccccagcgtagcggaggagggtcaggcgggcgcgccattccaggcccacgcgcag
gcagcggatcgccgacgtcctttgcggctcaggcgcgccgacgccgcggagctcgcggca
cacgaagcctatctgcgcggtcttgggggcaaggctctgtggcgtgaggaaagccctggc
gagcagacgtga
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integrated database retrieval system
