KEGG   Agrobacterium cucumeris: KZ699_00980
Entry
KZ699_00980       CDS       T09081                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
acuc  Agrobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:acuc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acuc03400]
    KZ699_00980
Enzymes [BR:acuc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KZ699_00980
    5.6.2.6  RNA 3'-5' helicase
     KZ699_00980
DNA repair and recombination proteins [BR:acuc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KZ699_00980
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: WHO08404
LinkDB
Position
1:192477..194996
AA seq 839 aa
MKHTESPTSGTHVGTLPLPFQKWFAEKGWSPRAHQLELMARARGGENMLLIAPTGAGKTL
GGFMASLTALAERGKVPAGAGFVGVHTLYISPLKALAVDIERNLTKPVFEMGLPISIETR
TGDTPQAKRQRQKVKPPDILLTTPEQVSLLLANKEAERFFRDLKYVVLDELHSLVTSKRG
HLLSLALARVRRHAPEVRFIGLSATVAEPMDLRRYLAPQGQGEPPAGLITVEGGAKPDIA
ILQTEERIPWSGHSASYAMKDLYPALKEHQTTLIFVNTRSQAERIFQELWTINDDNLPIA
LHHGSLDAGQRRRVEAAMAENKLRAVVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRI
GRANHRMDEPSKAILVPANRFEVMECRAALDANYIGAQDTPPIAEGALDVLAQHVLGMAC
AEPFDAEELYREVTSASPYADLPRATFDRVVDFTATGGYALRTYERYARIRQMKDGRWRV
SNPAVAQQYRLNLGTIVEAAELNVRMVKRNAKGTVGRGGMSLGKVEEHFLEQLVQGDTFL
FAGKVLRFEGIRENECLVSQAFSMDPKIPSYAGGKFPLSTYLADQVRSMLADPARWHALP
DQVRDWLAIQKEKSIIPKRDELLVETFPFRKRFFMVMYPFEGRLAHQTLGMLLTRRLERA
GAKPMGFVATDYSLAIWAMEDIGRRLKSRRLSLAELLDEDMLGDDLEAWLGESFMLKRTF
RNCAVISGLIERRHPGKEKTGRQVTVSADLIYDVLRSHEPDHILLEATRRDAAAGLLDIG
RLGDMLKRIKGHTTHRALEHVSPLAVPVMLEIGRETVAGEAMDDVLAEAADELIAEAMS
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaaacacaccgagtctcccacttccggcacccatgtcggcaccttgccccttccattc
cagaaatggtttgcagaaaaagggtggtctccgcgcgcccatcaattggagctgatggcg
cgggcgcggggtggtgaaaacatgctgctgatcgcgcccacaggcgccggcaagacgctg
ggcggcttcatggcctcgctcaccgctctggcggaacgcggcaaggtgccggcgggcgcc
ggtttcgtcggcgtgcacacgctctatatctcgccgctgaaggcgcttgccgtggatatc
gagcgcaacctcacgaaaccagtcttcgaaatgggcctgccgatttccatcgaaacgcgc
acgggtgacacgccgcaggccaaacgccagcgccagaaggtcaaaccgcccgatattctg
ctgaccacgcccgagcaggtgtcgctgctgcttgccaacaaggaggctgaacgctttttc
cgcgacctgaaatatgtggtgctagacgagctgcattcgctcgtcacctccaagcgcggt
catttgctgtcgctggcactcgcccgggtgcgccgacatgcgcccgaggtgcgcttcatc
ggtctttccgccaccgtggcggagccgatggatctgcgccgttacctcgcgccgcaggga
cagggcgaaccgccggccggtctcatcacggtcgaaggtggcgcaaaaccggatatcgcc
attctgcagacggaagaacgcatcccatggtcgggccattcggcaagctatgccatgaag
gatttgtatccggcgctgaaagagcaccagacaacgctcatcttcgtcaacacccgctcg
caggcggagaggattttccaggaactctggaccatcaatgacgacaatctgcccatcgcg
ctgcatcacggctcgctggatgccggccagcgccgcagggtggaagcggccatggcggag
aacaaattgcgcgccgtcgtcgccacatccacgctcgatctcggcatagactggggcgat
gtcgatctcgttgtgcatgtcggcgcgccgaagggcgcaagccgccttgcccagcgcatc
ggccgtgccaatcaccgcatggacgagccgtcaaaagcgatcctcgttcccgccaaccgt
ttcgaggtgatggagtgccgggcagcgctcgatgccaattacatcggtgcgcaggatacg
ccgccgattgctgaaggcgcgctcgatgttctcgcccagcatgtactcggcatggcctgc
gccgaacctttcgatgccgaagagctctatcgtgaagtaacaagcgcttcgccctatgcc
gacctgccgcgcgcaacctttgaccgggtggtggatttcaccgccaccggcggttatgcg
ctgcgcacctatgagcgttacgcccgcatccgccagatgaaggatggccgttggcgtgtc
tccaatccggcggtcgcgcagcaatatcgcctgaacctcggcaccatcgtcgaggcggcg
gaactgaatgtccgcatggtcaagcgcaatgccaagggcacggtcgggcgcggcggcatg
tcgcttggcaaggtggaagaacatttcctcgagcagctggtacagggagatacgttcctt
tttgccggcaaggtgctacgcttcgaaggcatcagggagaatgaatgtctggtgtcgcag
gccttctccatggatccaaaaatcccctcctatgccggcggcaagtttccgctttccacc
tacctcgcggatcaggtgcgctccatgctcgccgatcctgcccgctggcacgcgctgccg
gatcaggtgcgcgactggctggcgatccagaaggaaaaatcgatcattcccaaacgcgac
gagttgctggttgagaccttccccttccgcaagcgcttcttcatggtcatgtatcccttc
gaggggcggctggcgcaccagacgctgggcatgctgctgacccggcggctggagcgggct
ggagcaaaacccatgggtttcgtcgccaccgattattcgctcgccatctgggccatggag
gatatcggcagacggctgaaatcccgccgcctgtcgctggcagaacttctcgatgaggac
atgctgggtgacgatctggaggcatggctgggcgaatccttcatgctgaagcgcaccttc
cgcaactgcgccgtgatttccggccttatcgagcgccgccatccgggcaaggaaaagacc
ggtcgacaggtcacggtctccgccgatcttatttatgacgttcttcgcagccatgagccg
gatcatatcctgctggaagcgacaaggcgcgatgcggcggcggggcttttggacattggc
cgtcttggcgatatgctgaagcgaatcaagggccacaccacccaccgcgcgctggaacat
gtttcgccgcttgccgttccggtcatgctggaaattggccgcgagacggtggcgggcgag
gcgatggacgatgtgctggccgaggccgccgacgaattgatcgccgaggccatgtcctga

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