Athene cunicularia (burrowing owl): 113479031 Help Entry 113479031         CDS       T05777                                  Symbol HTT Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism acun  Athene cunicularia (burrowing owl) Brite KEGG Orthology (KO) [BR:acun00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acun03019]     113479031 (HTT)    04131 Membrane trafficking [BR:acun04131]     113479031 (HTT)    03029 Mitochondrial biogenesis [BR:acun03029]     113479031 (HTT) Messenger RNA biogenesis [BR:acun03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      113479031 (HTT) Membrane trafficking [BR:acun04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     113479031 (HTT) Mitochondrial biogenesis [BR:acun03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     113479031 (HTT) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_C-HEAT Htt_N-HEAT Htt_bridge Htt_N-HEAT_1 HEAT Motif Other DBs NCBI-GeneID:  113479031 NCBI-ProteinID:  XP_026702439 LinkDB All DBs Position 4 AA seq 3096 aa AA seqDB search MATMEKLMKAFESLRSFQQQQGPAAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQS LRNSPEFQKLLGIAMELFLLCSEDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEI KKNGASRSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLARISKRPEESVQETLAAAIPK IMAAFGNFANDNEIKVLLKAFVANLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNV LLGLLVPVEDDHPTLLILGVLLTLRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQL IQVYELTLHYTQHQDHNVVTGALELLQQLFRTPPPELLHALTASGGIAQVSVSKDEPASR NRSGSIVELIAGGGSSCSPVLARKHKGKILLGEEEGLEDDSETRSDVSTASFAASMKGEI TSELASSSGVSTAGSVGSSAADPTGHDIITEQPRSQHTLQSDSVDLTSCDLTSAATEGEE EDVLSRSSSQISAVQSDPTMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLEGA EGQYSGMQIGQLQDEEDEAANILQDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDR FTSKEDAPDSGDHENKPSRVKGDIGHYTDGNSAPLVHCVRLLSASFLLTGKKGALVPDRD VRVSVKALAVSCVGAAVALHPESFFSKLYKTPLEAMGEEYEEQYVSDILNYIDHGDPQIR GATAILCGTVVNSILIKSRFDVEKWLISVRSSTGNLFSLVDCIPLLQKTLKDESSVTCKL ACTAVRHCIMSLCSSSYSELGLQLIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEG KTESLHRGIHHYTGLLKLQERVLNNVVICLLGDEDPRVRHVAAASLMRLVPKLFYNCDQG QADPVVAVARDQSSVYLKLLMHETQPPSHFAVSTITRTYRGYSMLQSPTDVTMENNLSRV IAAISHALTISTTRALTFGCCEALCLLSTTFPVCTWSMGWHCGVSQPSPSDEAQKGCTIG MAGMVLSLLSSAWFPLDLSAHQDALILTGNLLAASAPKCLKNPWSAEEESNQGAAKQEEP WPALADRTLVTLVEQLFSHLLKVINICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKG KERESVEQSSVPMSPKKGGETSPATRQTDAPGPVPTSKSSSVGSFYHLPSYLKLYDVLKA THANYKVTLDLQNSNEKFGCFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFNREP TMATVCVQQLLKTLFGTNLASQYDGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTH FTQALADASLRNMVQAEQEHDASGWFDVLQKVSTQLKTSVTSAAKHRADKNAIHYHIRLF EPLVIKALKQYTTTTSVQLQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVG QFRESEAIIPNIFFFLVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPI VHDLFVLRGTNKADAGKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKR LSRQIADIILPMLAKQQMHIDSHDALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMAS VSTVQLWISGILAILRVLISQSTEDIVLSRIQELSFSPYLISCQAINRLRHGENNISTPE DRAELKQAKYLPEETFSRFLLQLVGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLI HIFKSGTFRRITAAATRLFTGDGSDGSFYTLESLSDLVQSMIPTHPSLVLLWCQILLLVN YTNYNWWSEVHQTPKRHSLSTTKLLSPQISGDSDESDSESKRGMCNREIVRRGALILFCD YVCQNLHDSEHLTWLIVNHVQDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENL AAPTTLKKTLQCLEGIHLSQSGAVLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATL QNSITQLPVEELDRIQEYLQNSGLATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDG EDQPALENVILDKDWYVSLVRSQCCMKSDSALLEGAELVNRIPQPDLNSFMTSKEFNLSL LAPCLSLGMNEITRDQKSSFFETARRVTLDHVSAAVQNLPANHQVFQPLLPTEPSAYWKK LSDIFGDEVIYQSTMTLCRALAQYLLLLSKLPAGLRVPPDKEDDILKFVVMSVEALSWHL MHDQIPLSVDLQAALDCCCLTLQQLSLWNLLASAANVTYACSLINCIRFIIEAVAVEPGN QLLSPERKKNTSKGLSEGEVDSNTQKTKHITAACEMVAEMVECLQTVLALGHKRNSSIPA FLTPVLKNIIISLARLPLVNSYTRVPPLVWKLGWSPKPAGDFGTVFPEIPVEFLQEKEIF KEFIYRINTLGWISRTQFEETWATLLGVLVTQPIVMDQEESQQEEDTERTQINVLAVQAI TSLVLSAMTIPVAGNPAVSCLEQQPRNKALKALDTRFGRKLSVIRGIVEQEIQAMVSKRD NIATHHLYQAWDPVPSLSPATTGALISHEKLLLQINTEREIGDMDYKLGQVSIHSIWLGN NITPLREEEWGEDEEDENDIPAPSSPPTSPINTRKHRAGVDIHSCSQFLLELYSQWILPS NPSKRTPVILISEVVRSLLAVSDLFTERNQFEMMYTTLTELRKVHPSEDEILVQYLIPAT CKAAAVLGMDKAVAEPVSRLLESTLRSTHMPSRIGALHGILYILECDLLDETAKQLIPII SEYLLSNLRGVAHCVNIHNQQHILVMCAAAFYLIENYPLDVGPEFSAGIIQMCGVMVSGS DESTPSIIYHCVLRGLERLLLSEQLSRLDSESLVKLSVDRVNVQSPHRAMAALGLMLTCM YTGKEKISPSRTTDVNPAAPDSESVIVAMERVSVLFDRIRKGFPFEARVVARILPQFLDD FFPPQDVMNKVIGEFLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQR TPVAMAMWSLSCFFVSASTSQWISAILPHIISRMGKSEQVDVNIFCLVAIDFYRHQIDEE LDRRAFQSVFEVVASPGTPYHRLLTCLQNVHKVTAC NT seq 9291 nt NT seq  +upstreamnt  +downstreamnt atggccaccatggagaagctgatgaaggccttcgagtcgttgcgctccttccaacagcag cagggtccggctgccatccccgaggagccgctccagagaccaaagaaagaactttcaact accaagaaagatcgagtgaatcattgcctaacgatatgtgaaaatatagttgctcagtct ttaagaaattctccagaatttcagaaactgctgggaattgctatggaactctttctcctc tgcagtgaggatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagtt ataaaagctttgatggattccaatcttcctaggttacaattagaactgtataaagagatt aaaaagaatggtgcttccagaagtctacgtgctgcgctctggagatttgctgagcttgcc catctagttcggcctcaaaagtgcaggccatacttagtgaaccttttgccctgtctagcg cgaataagtaagagacctgaagaatcagtacaagagacactagctgcagcaataccaaaa atcatggcagcgtttggcaattttgcaaatgacaatgagattaaggttttattgaaggct ttcgtagctaatcttaaatccagttcccctactatccgtcgaacagcggcaggatcagca gtaagcatctgtcaacattcacgaagaatgcagtatttttatgcctggttattgaatgta cttttaggcttgttggttcctgtggaagatgatcatcccactcttttaattctgggtgtt ttacttacactaaggtatctcatacctttattacaacagcaagtaaaggataccagcctg aaaggcagttttggcgtaacaagaaaagaaacagaaatttcaccttcaccggaacaactt atacaggtttatgaattgactctgcattacacccagcatcaggaccataatgttgtgact ggagctttagaattattacaacagctctttagaacgccaccacctgaacttctccatgcc ctgactgcctcagggggcatcgcacaggtcagtgtatccaaagatgaacctgccagcagg aaccgcagtggaagcatagtggaacttatagctggaggggggtcttcatgcagccctgtt cttgcaagaaagcataaaggtaaaatacttcttggtgaagaagaaggtttggaggacgat tctgaaacccgatcagatgtcagcactgcatcatttgcagcttctatgaagggcgagata accagtgaactagcttcttcatcaggtgtgtcgacagctgggtcagtagggagttcagct gctgatcctactggacatgatatcattactgagcagccacgttctcaacatacattgcag tcagactctgtagacctaacaagctgtgatttgacaagtgcagctactgaaggggaagaa gaagatgtgcttagtcgaagctccagccaaatcagtgctgtccagtcagatcccactatg gacttaaatgatggtacacaggcttcctcaccaattagtgacagctctcagactactaca gaaggtccggactctgctgtaaccccttcagacagttctgaaattgttttggagggtgct gaaggacaatattctggaatgcaaattgggcagctacaggatgaggaagatgaggctgca aatattctccaagatgattcatcggagtccttcagaaattcttctattgctcttcaacag cctcacctgttgaaaaccatgagccatagtaggcagccttctgatagcagcgtagacaga tttacatcaaaagaagatgcaccagattctggtgatcatgaaaataagccctccagagta aagggagacataggtcactataccgatggaaattctgctcccttagtgcactgtgttaga cttctgtcagcctcttttctacttactgggaaaaaaggagctttagttcctgatagagat gtgagagtcagtgtaaaagccctggcagtaagttgtgttggagcagccgttgcacttcac cctgagtctttcttcagcaaactgtataaaacaccccttgaagcaatgggagaagagtat gaggagcaatatgtatcggatattctgaactatattgaccatggagatccccagattaga ggagctactgccattctgtgtggaacagttgtcaactccattctaattaaatcccgcttt gatgtggaaaaatggctaataagtgtcagaagctcaacaggaaatctcttttccttggta gactgcatacctctgttacagaaaacactgaaagatgagtcctctgttacatgcaaactg gcttgtacagctgtgaggcattgcatcatgagcttatgtagtagcagttacagtgaacta gggctacagttaattgttgatctccttacgctgaagaatagttcatattggctagtaagg acggaacttctggagacacttgcagaggtagacttccggctagtcagcttcttggaagga aaaactgagagcttgcacagaggtattcatcattatactggtctactaaaacttcaggag agagtgcttaataatgttgtaatatgtctgcttggagatgaagatccaagagtgagacat gtagctgcagcttcattaatgaggcttgttccgaagctgttttataactgtgatcaagga caggctgatcctgttgtggcagtagcaagagaccaaagcagcgtctacctgaaactacta atgcatgaaacacagcctccgtctcactttgcagtgagcactatcaccagaacatacaga ggttacagtatgctgcaaagtccaacagatgtcactatggaaaacaacctctcaagggtt attgcagcaatctcccatgcattgacaatatctactacaagagcacttacgtttggctgc tgtgaagctttgtgtcttctctccacaacatttccagtctgcacctggagcatgggatgg cactgtggtgtttcccagccaagtccttcagatgaagctcagaagggctgcaccattgga atggctggcatggtcctgtctctcctttcatcagcatggttccccctggacctctctgca catcaggatgctctgattttgactggaaacttgcttgcagcaagtgctcccaagtgctta aagaatccctggagtgctgaagaagaatcaaatcaaggtgctgcaaagcaggaggaaccc tggccagctctggcagatcgaactcttgttactttagtagaacagctcttttctcatctg ctgaaggtcattaatatttgtgcacatgtaatggacgacgttgctcctggcccagcagta aaggcagcattgccttctctcacaaacccaccttctcttagtccaattagaaggaagggg aaagagagggagtctgttgaacaatcatctgtgccaatgagccctaaaaagggtggtgaa acgagtccagctactaggcaaactgatgctcctgggcctgtgccaacaagtaaatcttct tcagtaggaagcttttatcatcttccatcatatctgaagttatatgatgtcttgaaagca acccatgctaattataaggttactttggatctccagaacagtaatgaaaagtttggatgt tttttacggtctgccctagatgttctgtctcaaatcttggaacttgctactcttcaagac attggaaagtgtgtagaagaaattttgggatacctaaaatcatgtttcaacagagaacca acaatggcaacagtctgtgtacagcagttactgaaaacattgtttgggacaaatctggct tctcagtatgatggcttgtcttcaaaccctaacaaagctcaaggcaaagctcaacgccta ggttcttccaatttgagacctggtctctatcattattgcttcatggcaccatacacacat tttacacaggcccttgctgatgccagtctaagaaacatggttcaggctgagcaggaacat gatgcttcggggtggtttgatgtgttgcaaaaagtttctacacagctgaaaactagcgtt accagtgcagcaaaacaccgtgctgataagaatgctattcactatcacattcgtttattt gaaccccttgtcataaaagcattgaaacaatatactacaacaacatcggtacagctgcag agacaagttctagacttgcttgctcaactggttcagctacgagttaactactgtcttctg gattcagatcaggtttttattggatttgtgctgaagcagtttgaatacattgaagtagga cagttcagggagtctgaagcaattattcctaatatattttttttcctggtgttgctgtcc tatgagaggtatcattccaaacagataattggaattcctaagatcattcagctgtgtgat ggtatcatggccagtgggaggaaagctgttacacatgcaataccagctctgcaacccatt gttcatgatctctttgtgttaagaggaacaaataaagctgatgctggaaaagagttggaa acacaaaaggaggtggtagtgtcaatgctactgagacttattcagtaccatcaggtgcta gaaatgttcatcttagtattgcaacagtgtcataaggaaaacgaagacaaatggaaaaga ttgtcccggcaaatagctgatattattctcccaatgcttgcaaaacaacagatgcatata gactctcatgatgctctgggagtattaaacactttgtttgaaattttggctccttcatcc ctccgccctgtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatca gtgagcactgtccagctatggatttctggaattttagctatccttagagttctgatctca cagtcaacagaagacattgttttatcccgtatacaagagctttccttctcaccatatttg atttcatgtcaagcaattaacagactgagacatggagaaaataacatatccacaccagag gatcgtgctgagcttaaacaggctaagtatctgcctgaagagacgttttctaggttttta ttacaactggttggcattctattggaagatattgttacgaaacagttgaaagtggacatg aatgagcagcaacatactttctactgccaggagctgggcacactgcttatgtgcttaata catatcttcaaatcagggacatttagaagaatcacagctgcagccaccagactttttaca ggagatggatctgatggtagtttctatactcttgaaagtttgagtgaccttgttcagtcc atgattcccacacatccttctttagttctcctctggtgtcaaatcctgcttcttgtcaat tataccaactacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttct actactaaattgcttagccctcagatatctggagacagtgatgaatcggattcagaatct aaacgtggcatgtgcaatcgagagatagtgagaagaggagcactcattcttttttgtgac tatgtttgtcaaaatctacatgattcagaacacttgacctggcttattgtgaatcatgtt caagacttgattaatctgtcccatgagcctccagtacaagactttattagtgctgttcac aggaattcggcagccagtggtctcttcatccaggccattcagtcacggtgtgagaatctc gcagctcccacaactctgaagaagactttacagtgcttagaaggaatacatctcagccag tctggggctgttttaacattgtatgttgataagcttttgtgtactccgttccgtgtactt gctcgcatggttgacacactggcttgtcgtcgggtagaaatgcttttggctgcaacttta cagaacagcattactcagttaccagttgaagaactggatagaattcaggaataccttcaa aacagtggattagcaacaagacaccaaagactttactcactcttggataggtttcgtctt atggtagcaccagacacaactagtccttcacctctggttacctcacatccactagatgga gaagaccaaccagctttagagaatgtaattctagacaaagactggtatgtgtcactagtg aggtcacagtgttgcatgaagtctgactcagcactgctagaaggtgcagagctggtaaat aggattcctcagcctgacctgaactccttcatgaccagcaaggaattcaacctgagcttg ttagcaccttgtttaagccttggcatgaatgaaatcacgagagatcagaagagtagcttc ttcgaaacggctcgtagggtaactctggatcatgtgtctgctgctgtacaaaaccttcct gccaaccaccaggtttttcaaccactattgccaactgagccatcagcctactggaaaaaa ctaagcgatatctttggagatgaggtgatatatcagtctaccatgacgctttgtcgtgca ctggctcagtatttgttgttactctcaaaactaccagctggtctccgtgttcctcctgac aaagaggatgatatcctgaaatttgtagttatgtcagtagaggcactatcatggcattta atgcatgaccagattccattaagtgttgatcttcaagctgctctggattgttgctgtctg acattacagcagcttagtctctggaatttactggcttctgcagctaatgtgacatatgct tgctccttaattaattgcattagatttatcatagaagcagttgctgttgaacctggtaat caactccttagccctgaaagaaagaagaatacttcaaaaggcttaagtgagggtgaagtt gattcaaacacacagaaaactaaacatattactgcagcttgtgaaatggtagctgagatg gtggaatgcttacagactgtgttggcactggggcacaaaagaaacagcagtatcccagcg tttcttactcctgtcctcaagaacatcatcatcagtttagcaaggctgcctctagtgaac agttacacaagagtacctcccttggtttggaaattaggctggtcaccaaaacctgcaggt gactttggcacagtttttcctgaaatcccagtagaatttctacaagaaaaagaaatcttt aaggagttcatctatcgcattaatacacttggatggatcagccgtactcagtttgaagag acttgggctaccttacttggtgtgcttgtaactcaacctattgtaatggaccaagaggag agccaacaagaggaagatacagagaggacccaaattaatgttcttgcagtacaagccata acttccttggtgctgagtgcaatgacaatacctgttgcaggcaatccagcagttagctgt ttggaacagcagccccgcaacaaagctttaaaagctctggacacaaggtttggaaggaag ctaagtgttatcaggggaattgttgaacaggaaatccaagcaatggtatctaagagagat aatattgctactcatcacttatatcaagcttgggaccctgttccatcgctttctcctgct actacaggtgctcttatcagccatgaaaaactcttactgcagatcaatactgaacgagaa ataggagatatggattataaactgggacaggtctcaatacactccatatggttaggaaat aatatcactccattgagagaagaagagtggggtgaggatgaagaagatgagaatgacata cctgctccttcctcaccaccaacctctcctattaacaccaggaaacaccgggctggtgta gatatacattcttgttctcagttcttgcttgaactgtatagccagtggatattgccatca aaccctagcaagagaacgccagtcattttgattagcgaagtggtgcgatcacttctggca gtatcagacttatttacagaaaggaatcagtttgagatgatgtatacaacattgacagaa ttgcgaaaggtacatccatcagaagatgagattcttgtacagtatttgataccagccact tgcaaagctgctgctgttctcggaatggataaagctgtggctgaaccagtaagtcgacta ctggaatcaaccctaagaagcacccatatgccaagtcggattggagctctgcatggaatt ctttatatccttgaatgtgacttgcttgatgagacagcgaagcaactcattccaattatc agcgagtatctgctctccaatttgagaggagttgcacattgtgtgaatatccataaccaa cagcacatcttggtaatgtgtgcagctgctttctatttgattgagaattacccacttgat gtagggcctgaattctctgcaggaattatacagatgtgtggagtcatggtgtctggaagt gatgaatcaacaccatccattatttatcattgtgtcctgagaggattagaacgactcctt ctttcggaacaactttctaggctggatagtgaatcattggttaaactgagtgtcgacaga gtgaatgtgcagagcccccatagagcaatggcagcacttggattaatgctgacttgcatg tacacaggaaaggaaaaaatcagccccagtcgtaccacagatgtaaatcctgctgctcct gacagtgaatctgtgattgtagctatggaacgagtatctgttctttttgacaggatcaga aagggatttccttttgaagctagagtagtggctcggatccttccacaattcctcgatgat tttttccccccacaagacgtaatgaataaagttattggagaatttttatcgaatcagcag ccttacccgcaattcatggcaacagtagtttataaggtattccagacactgcacagcact ggacagtcttcaatggtccgtgactgggtgatgctctctctctctaatttcacacaaaga acacctgtggcaatggcaatgtggagtctttcctgtttttttgtcagtgcttccaccagt caatggatttcagcaattcttccacacattatcagcagaatgggaaaatcagagcaagtg gatgttaatatcttctgtttggtggccatagacttctaccgacatcagatagatgaagaa ttagatcggagggcctttcagtcggtgtttgaggtggtagcgtctccaggaaccccatat catcgcttattaacttgtttgcaaaatgtccacaaggtcacagcatgctga

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