Acinetobacter sp. TGL-Y2: AMD27_13955
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Entry
AMD27_13955 CDS
T04425
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acv
Acinetobacter sp. TGL-Y2
Pathway
acv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMD27_13955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acv03021
]
AMD27_13955
03400 DNA repair and recombination proteins [BR:
acv03400
]
AMD27_13955
Enzymes [BR:
acv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMD27_13955
Transcription machinery [BR:
acv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMD27_13955
DNA repair and recombination proteins [BR:
acv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMD27_13955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AMW79886
UniProt:
A0A143G812
LinkDB
All DBs
Position
complement(2915068..2916075)
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAASGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGAGDVTAADLRLPHN
VEVINPEHLIGTLSASGSLKMRLKVVQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaacgagtttctcactccgcaagcgatcaaggtcgaagcggcaagc
gggacctcggcaaaagtgattctagaaccattagagcgtggctttggtcatactctaggt
aatgctttacgtcgcattcttctttcatctttacctggcgctgctgtggttgaagttgag
attgaaggcgtcgagcacgagtacagtactttagaaggcttgcagcaggacatcgtcgag
ctcttgctgaaccttaaaggattgtctattaagctgttcgatcaaaatgaagcatatttg
acgttggaaaaacaaggggcaggtgacgtaacagcagctgaccttcgtttaccgcataac
gttgaagtgattaaccctgaacatttgatcggcacgttaagtgcatcaggctcattaaaa
atgcgcttgaaagttgttcaaggccgtggttacgagacttctgactcacgcttcccagaa
ggcgaaactcgcccagtgggtcgtttacagttagatgcatcttatagcccaatcaaacgt
gtgtcttacacagtggaaaacgctcgtgtagaacagcgtacggatcttgacaagttggtc
attgatcttgaaacaaatggtactgtagatccagaagaagcaatccgtaaagcggcaaca
atcttgcaacaacaaattgcaatttttgttgatcttcagaaagatcaagcgccagttgct
caagaacctcgtgaagaagttgatccaatcttgcttcgtccagtagatgatctagagctt
actgttcgttctgctaactgtttgaaagcagaaaatatttactacatcggtgatcttgta
caacgtactgaagttgagttgttaaaaactcctaacttaggtaaaaaatcgttgactgag
attaaagatgttctggcatcgaaaggcttgcaattgggcatgcgtttagagaactggcca
ccggctagcctccgcatggacgatcgctttgcttatcgtagtcgttaa
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