Alicyclobacillus cycloheptanicus: JI721_15835
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Entry
JI721_15835 CDS
T08830
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
acyc
Alicyclobacillus cycloheptanicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
PAS_9
AAA
AAA_5
PAS_8
HTH_30
Mg_chelatase
HTH_28
AAA_3
HTH_20
HTH_29
AAA_19
HTH_23
PAS_7
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
WDM01115
LinkDB
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Position
3373004..3374836
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AA seq
610 aa
AA seq
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MSINHVLEFHHSARSCTRQHATIAAGGAGLVFRVLMVGTGPQSEQVMKALARHPAVEWLG
VVDPGAGSDVQVRAADDACAHALFVYPALSGALSAAVEQQVNVVLDWSNEVSDTLLTAHH
LRATVVSGPALDLLVQWVGAYNELAARLDAQEQDLQLLREVQTLLEAVIQSTQDAITVVD
KDGRQILINPAYTRLTGLSPEQVIGKSADVDIAEGDSMHMQVLTTGRPVRNAQMKVGPYR
REVIVNVAPILVNGELRGSVGVIHDISEIKQLTEALDRANKLLRSLHAKYTFSDVVGKSP
AMVVAVDQAKRAAKTPATVLLRGESGTGKELFAHAIHNESDRRLRPFVRVSCAAISESLL
ESEMFGYEEGAFTGARRGGRRGLFEEASGGTLFLDEIGEMSIPTQAKLLRALQEKEIVRV
GGTTPIPINVRIIAATHVNLEQAVAKGRFREDLYYRLNVIPIVIPPLRYRKEDIEAIATQ
IVLRLNQAYGRNVTHLTPAAVATLMAYDWPGNVRELENVIGRAMTNVDYRETELDARHLP
ILTPHAHGEDPDSLAAALPLGGSLQEVLHTAERIAIERALAAAGGNKTEAARRLGISVRS
LYYKLNQTAE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcaatcacgtcttagagtttcatcatagcgcacggtcatgcaccagacaacat
gctacaatagcagcaggaggtgccgggttggtgtttcgcgtgctgatggtcggaacgggg
ccgcaaagtgaacaagtgatgaaagcgctggcacgccaccctgccgtggaatggctgggc
gtggttgaccccggggccggctcggatgtgcaggttcgcgccgcggacgatgcgtgcgca
cacgccctttttgtctatccggcgctgtccggcgccttgtcggcggcggtagaacaacag
gtcaatgtcgtgctcgactggtcgaacgaagtctccgacaccctgctgaccgcacaccat
ctccgggccacggtcgtgtccggcccggcgctcgacttgctcgtgcagtgggtgggcgcg
tacaacgagctggctgcccggctggacgcccaagaacaggacctgcagctgctgcgcgaa
gtgcagacgctgttggaggccgtgattcaaagcacccaggacgccatcacggtcgtcgac
aaggacggccgccaaattctcatcaacccggcttacacccgtttgacaggcttgtctccc
gagcaggtcatcggcaagtccgccgatgtcgatatcgcggaaggcgacagcatgcacatg
caggtgctcaccaccggtcggccggtacgcaatgcgcaaatgaaggttgggccgtaccgg
cgcgaagtcatcgtgaacgtcgcgcccattctcgtcaacggtgaactgcgtggaagtgtg
ggcgtaatccacgacatttccgaaatcaagcagctgacggaggcgctcgaccgagccaac
aagctgctgcgctcgctgcacgccaaatatacgttttccgacgtggttggcaagagcccg
gccatggtggtcgcggtcgaccaagccaaacgtgccgcaaagacgcccgccacggtgctg
ctgcggggagagtctggcaccggcaaggagttgttcgcccacgccatccacaacgaaagt
gaccgccggctgcgcccgtttgtgcgcgtcagctgcgcggcgatttcagagagtctgctc
gaaagcgagatgttcgggtacgaggaaggcgcctttacgggcgcccgccgcggcggcagg
cgggggttgtttgaggaggcctccggcgggacgctgtttctcgacgagattggtgagatg
agcatccccacgcaagccaaactgctgcgcgcgctgcaggaaaaggaaattgtccgtgtc
ggcgggacgacgccgattcccatcaacgtgcggatcatcgccgcgacgcacgtcaatctc
gaacaagcggtggccaaaggacggtttcgggaggacctgtactaccggctcaacgtgatc
ccaatcgtcattccgcccctgcgctaccgcaaggaagacatcgaggcgattgcgacacag
attgtgctgcggctcaatcaggcctatgggcgcaacgtgacccatttgacgccggcggcg
gttgccaccttaatggcatacgactggccgggcaatgtgcgtgaactggagaatgtgatt
ggccgggcgatgacgaacgtggactatcgcgagaccgaactggacgcgcgtcacttgccg
attctgaccccgcacgcacacggcgaggacccggacagcctcgctgccgcactgccgctt
ggcgggagcctgcaggaggttctgcacaccgccgagcgcatcgctattgaacgggcgctc
gcagcggcgggcggcaataagacagaggccgcacggcggctggggatttccgtgcgcagt
ctgtactacaagctgaatcagaccgccgagtga
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