Anser cygnoides domesticus (swan goose): 106032617
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Entry
106032617 CDS
T04896
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acyg03000
]
106032617 (PRDM1)
Transcription factors [BR:
acyg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
106032617 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
106032617
NCBI-ProteinID:
XP_013031115
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MNATGKFAVHGAGGGKVVWRARGGGEAAGLAASCAVTFGVLFLCLQIIHLKTPEDGLQKA
ATQCSSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSADGGT
LTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYF
WRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQE
LLVWYCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILK
MESNPPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRPHIPEDYLKASLA
YGMDRPSYVTHSPIQSSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRESYS
YLNGSYGSEGLGSYPGYAPPSHLPSAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGIN
NFNLFPRMYPLYGNLLSGGSLSHHMLNPATLPSSLPSEGGRRLLQPDHPRDFLIPAPNSA
FSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRN
VTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQL
AHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLK
LHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDI
SDNADKLEEVEDNIDLTSVVEKDILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESS
DMSIMKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccacgggaaagtttgccgttcacggtgcaggcggtgggaaagtggtctggagg
gcgcgggggggcggcgaggcagcggggctggctgcgagctgtgctgttacatttggggtt
ttgtttttgtgtctccagatcattcacttgaagacgccagaggacggtttgcagaaggct
gctacacagtgtagctcggacgctgtgagtttcaagaatctggtgaaagggagagagtgg
acaatgaaaatggacatggaggatgctgacatgactctgtggacggaagccgattttgaa
gagaagtgcacgtacattgtaaacgaccacccatgggatcccagcgccgacggaggcacc
ctaactcaggcagaggcttccttgccaaggaacttgactttcaaatacgcatcgaactgc
aaagaggtcactggagttataagcaaagagtacatcccaaaaggaacgcgctttggaccc
ctggtaggagagatctataccagcgatacggttcccaagaatgcgaacagaaaatacttt
tggcggatctattcaagtggtgagcttcaccacttcattgatggatttaacgaggacaag
agcaactggatgcgttatgtaaaccctggctactccgttcaggaacagaacttggcagcc
tgtcagaatggaatgaacatctacttctacactatcaagcccatccctgccaaccaagag
ctgcttgtgtggtattgccgagactttgcagagaggctgcactatccctcctccagagag
ctgacaatgatgaacctcacacaaacacacgttaatccaaagcagcacagtgctgataaa
gatgagctctatcagaaaagcatcccaaagaaggagcacagcgtgaaagaaatcctgaaa
atggaatccaatcctccaaagggaaaagacttcttccagaccaacatttcaccagttact
ccagaaaaagacttggatgacttgcgtaagaactatagcccagagaggtgtttcttccct
cgagttgtctacccaatccgacctcacattccagaagactatctgaaagcttccttagca
tatgggatggacagacccagctacgttactcactcgcccatccagtcatctactacacca
agtccttctgggaggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagt
ccaggggtcacagtctcacctctggcacctacgtcccaggagcacagagagtcgtactct
tacttgaacggatcctacggctcagagggattggggtcttatcctggatatgcacccccc
agccatctcccgtctgcctttctaccgtcctataacccccactaccccaaatttctgtta
cctccattcaatatgagctgtaataacctgagcgctttgaacaatatcaatggcatcaac
aatttcaatctcttcccgcggatgtatcctctctatggcaacctactcagcggaggtagc
ctttcccaccacatgttgaaccccgccacgctccccagttcactgcccagcgaaggaggc
cgtcgtttgctgcagcctgatcatccaagagacttcctcataccagcacctaacagtgcc
ttctctatcacaggcgctgctgccagcatgaaggacaagccgtgcagccccaccagcggg
tcacccacagctggtacagcagccagttcagaacacataatgcaacctaaacctacctca
gtggtgttggccgccaccggcggtgaagaagccatgaatctcattaaaagtaagaggaat
gtgactggttacaaaaccctcccatacccactgaagaagcagaacgggaagatcaagtac
gaatgcaacgtttgctccaagacctttggccagctctccaatctgaaggtgcacctccga
gtacacagcggagagagaccatttaaatgccagacctgcaacaagggcttcacccagctg
gctcacctccagaagcactatctggtacacacaggagaaaaaccccacgagtgtcaggtt
tgtcacaagcggttcagcagcaccagcaatctcaaaacccacctgcggctccactctgga
gagaagccttaccagtgcaagctgtgcccagccaaattcacccagtttgtgcacctgaag
ctgcacaagcgtctccacacgcgggaacgtccccataaatgcatccactgccacaagagc
tacattcacctctgcagcctccaggtccatctgaagggcaactgcccggtcgcccctgcc
tccggcctctcgatggaggacctgaatcgaatcaatgaggagatcgagaagttcgacatc
agtgacaatgccgacaagttggaagaagtggaggacaatatcgacttaacatcggttgtg
gagaaggatatactgaccatgctcagaagggaaatggaaggagctaatctcaaagtatct
ttacagaggaacctgggaaatggacttatctcctcaggatgcaacctttacgagtcttcg
gatatgtcaattatgaagttgcctcacggtcacccactacctctgttacctgtaaaggtc
aagcaagaaacagttgaaccaatggacccttaa
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