Anser cygnoides domesticus (swan goose): 106038525
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Entry
106038525 CDS
T04896
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg03013
Nucleocytoplasmic transport
acyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106038525 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
106038525 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106038525 (THOC2)
03041 Spliceosome [BR:
acyg03041
]
106038525 (THOC2)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
106038525 (THOC2)
Spliceosome [BR:
acyg03041
]
Complex C
Other components
EJC/TREX
106038525 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106038525 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
106038525
NCBI-ProteinID:
XP_047926562
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MAGAIPAEWIKNWEKGGKNEFLQLCRTLSENKSHDNVGFRDIQQVLYELACHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDNFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPPSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAIAATVQN
GPGGAGMPTSLTINTAKLEESPAEETEKLKEKSQGAVKVINKAVNTTPKVTTSNGNSASN
SKIIKEKDDKEKSGKEKDKEKKEKIPAATPEMKALGKDGKDKPKEERVNKDDKAREIKEK
TPKSDKEKEKAKKEEKASKEEKSKTVVTTVESKSAAEKEREKEPSREKDVAKDMKSKEIT
KGGEKIPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKDNLNELKDSSAKHY
INHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRKDRKRDHSNSDREVPQDSAKR
RKEENGTTGSSKHSKSESPSDSPRSNEKEKEKSKSKSSGKEKGDSIKAEKMEKSSSGSKK
ESRHDKEKTEKKEKRESAGGKEEKKHHKSSDKHR
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgatccccgccgagtggataaagaactgggagaaagggggcaagaacgag
tttttgcaactgtgtcgcactctcagtgaaaacaaaagccatgataatgtcggtttcaga
gatatccaacaggttttgtatgagcttgcatgtcatgttgtcagaggaaatctgaagcat
gatcaagcctctaatgttcttggtgatgttatagaatttcgggaagacatgccttccatc
ttagctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaagtaag
agggataattttactcaactggtattagcctgtttgtatcttgtatctgatactgtccta
aaggagcgtttagatccagaaacactggaatcactaggacttatcaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaagctattttataaacaacagaaatttaat
ctcttaagagaggagaatgaaggttacgccaagctgattgcagagctggggcaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctggaagtctatgagtgcaggcctgag
tatgatgatttctttgtaccactgatagagtcgtacatgtacatgtgtgaaccacaaact
ttatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacgcct
ccttccttatacagagttgctgctgtgctgttgcaacataatctgatagatttggaagat
ctttatgtccatcttcttccaggggataatgccatcattgaagaacacaagcgagagata
gtggaagctaagcaaatcgtcagaaaacttacaatggttgtcttatcctctgaaaagact
gaggaaaaggagaaggaaaaagaaaaagaggaggagaaaactgaaaagcctcctgataat
cagaagcttggtttattggaagctttattaaaaattggtgattggcagcatgcacaaagt
attatggatcagatgcctccattttatgctacttcacataagcctattgcaattgccctt
tgccagcttgtgcatgtgacaattgaacctttgtaccgcagggttggtgtaccaaaaggg
gcaaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
ttcgaagacttgagaaaggaagtgttcaacatgctgtgctaccttggtcctcatctctcc
cacgatcccattttatttgctaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagtaagcaagaagataaagagaaaatggagatactgtttagctgtttg
ctgagtattactgatcaagttttgcttccatctctttctttgatggactgcaatgcatgc
atgtctgaggagttatggggaatgttcaaaacttttccatatcagtaccggtaccgtctt
tatggacaatggaaaaacgaaacctacaatagtcatccacttctagtgaaagttaaagct
caaaccatagaccgagccaaatatattatgaagcgtctaactaaggaaaatgtgaaaccc
tctggaagacaaatcggaaagctcagtcacagcaatcctacgattttatttgattatatt
ttatcacaaatacaaaaatacgataacttaataaccccagttgttgattcactgaaatac
ctcacttcactgaattacgatgtcttggcatactgtatcattgaagcactggcaaatccc
gagaaggagagaatgaagcatgatgacactactatttcaagctggcttcagagtctggct
agcttttgtggtgctgttttcagaaaatacccaattgaacttgctggcctacttcaatac
gtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagta
caaaaaatggcagggatagaaattacagaagaaatgacgatggagcaattggaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaatcaggaatacaaaa
aaatcctctcagagattgaaagatgcattattggaccatgaccttgcccttccactgtgc
ctgcttatggctcagcagagaaatggtgtgatctttcaagagggaggggaaaaacatctg
aagctggtgggaaaactgtatgaccagtgccatgacaccctggtacaatttggtgggttt
ctagcatccaatctaagcacagaggattacatcaagcgagtgccttcaattgatgttctc
tgtaatgaatttcacacacctcatgatgctgcgtttttcctctcgagacctatgtatgct
caccatatttcatccaagtatgatgaactaaaaaaagctgaaaagggaaataaacagcag
cacaaggttcacaaatacattacatcgtgtgagctggtaatggcacctgttcatgatgct
gtgatctctctgcaccttcccaaagtctgggatgatatcagtcctcagttctatgctacg
ttctggtctttgacaatgtatgaccttgctgtcccacatagtagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaggaaaaagaacgttgcacagctcttcaagacaagctccttgaagaggagaag
aagcagttggagcatgtgcaaagggttctacagagactgaaactggagaaggataactgg
cttctggcaaagtctaccaaaaatgagactatcacaaaatttttgcagttatgtatattt
cctcgctgcattttttcggcaatcgatgcagtttattgtgctcactttgtagaactggtg
catcagcagaaaacacccaacttctccactcttctctgctatgacagagttttctctgat
attatatatacagtagcaagttgcactgaaaatgaagctagtagatatggcaggttttta
tgctgtatgctggagactgtgactagatggcacagtgacagagtcatatatgaaaaggaa
tgtggcaactatccaggcttcctaactatattacgggcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacatgtggtacacaaatggcactataaa
ttaactaaggcttctgtacactgccttgaaacaggtgaatatacgcatatcagaaacatc
ctgattgtgctgaccaaaatcctcccatggtatccaaaagtgttgaacctgggccaagcc
ttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacccgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctatagctgcaacagtacaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaacacagctaaactggaggaa
agccctgctgaagagactgaaaaactaaaggagaagtctcagggtgctgtgaaagttatt
aataaagctgtcaacactacaccgaaggtgacaacaagcaatggaaacagtgcttctaat
agcaaaattattaaggagaaagatgataaagaaaaaagtgggaaggaaaaagataaagaa
aaaaaagaaaagattccagctgccactccagagatgaaggcacttgggaaggatgggaaa
gacaaacctaaggaagaacgggtgaacaaagatgataaagcaagagagatcaaggagaaa
acaccaaaatctgacaaggagaaggaaaaagccaagaaagaagaaaaagcttcaaaggaa
gaaaaatccaagacagttgttaccaccgtcgagtcaaagtcagctgcagaaaaggagaga
gaaaaggagccatccagagaaaaagatgtagcgaaggatatgaaatccaaggaaattact
aaaggaggagaaaagattccagtagctgggtccttgaagtctcctgttccccgatcagaa
acatcagaatctgagagggaacaaaaacgccgcaaagttgatacccattcttctccatca
cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcagcaaagcactac
attaaccacactactccaacactgtccaagagtaaagagagagaagtggacaagaaagat
ttggacaaatcaagggaaagatccagagagagagagaagaaagaggaaaaggacaggaaa
gaccgaaaaagggatcattcaaacagtgaccgagaggtaccacaggattcagctaaacga
cgcaaagaggaaaacgggacaactggttcttcaaaacatagcaaaagtgaaagtccttct
gattctcctcgctcaaatgaaaaagagaaggagaagagcaaatcaaaatcttcaggaaag
gaaaaaggtgattcaatcaaagcagaaaagatggaaaagagctcctctggtagcaaaaag
gaatcaagacatgataaagaaaaaacagaaaagaaagaaaaacgagagagtgctggaggg
aaagaagaaaagaaacatcataaatcttcagacaagcacagataa
DBGET
integrated database retrieval system
