Anser cygnoides domesticus (swan goose): 106039548
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Entry
106039548 CDS
T04896
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
acyg
Anser cygnoides domesticus (swan goose)
Pathway
acyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106039548 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acyg03019
]
106039548 (PNLDC1)
Enzymes [BR:
acyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106039548 (PNLDC1)
Messenger RNA biogenesis [BR:
acyg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106039548 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF6078
Motif
Other DBs
NCBI-GeneID:
106039548
NCBI-ProteinID:
XP_047923849
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MDVGAAGFGRLLPGLRDRVRRAAFLGIDMEFTGLYSAFPQNNQPSLFDSPAGRYLKVRQS
VQRFTVTQLDMSSTSPFQFRSPSLAGLAIFSKENSNKYVVHSYNFFLFPSTLGVTDVEFT
LSASSIQFLSHYGFDFNKFLKDGIPYMNELQEKSLNQRLSEGSWRACSAVDRDVMKKAID
EVTSWIVAAEEGETMILKDLSGSQMLEVQLVLREALQNVWTQPLEDSEVVVKKVSPQQRR
LLENSSYDYCRKELILMSARGFTNLFQILVKAKKPLVGHNMFIDLCHLHDKFYKPLPESY
EEFKRNIHNLFPVLIDTKTITKSIWKNYQFPRVSTLLDVYEVLCSSNLNPTDPTGPVIAL
ASDCSRYAEKKSPHEAGYDAFLCGSVLLKSAHLLLRRVTKCSDTVEADPSFSQYLTVLAE
YLNKVNFIRGGASSINFSGEDVPSQHPPLLVVRVRGWPQMNERQIYQELKALCRFDVRRL
SGNQFILLSNKFKHVRLVLRDYKHHPNLQISVYRHWRHSPHVNCLLQVSGIVALWSLLAF
VLGGPPCSS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggggctgcgggcttcgggcggctcctgcccggcctgcgggaccgtgtccgc
cgcgccgccttcctgggcattgacatggagttcactggcttatactcagctttcccacaa
aataaccagcccagcctgtttgattcccccgccgggcggtacctgaaggtcaggcagagc
gttcagcgcttcacagtcacccagctcgacatgagctcaacatcaccatttcaattcagg
tctccctctcttgcagggctggcaatattctcaaaagaaaattcaaacaagtatgtggtg
cattcatacaacttttttctctttccctcaacattgggagttacggatgttgaattcacc
ctctctgcatctagcattcaattcctgtctcattatggctttgactttaataagttcctg
aaagatggaatcccgtacatgaacgagttacaggagaagagccttaaccagcgtctctca
gagggtagctggagagcctgcagtgctgtggacagggatgtgatgaagaaggctattgat
gaagtgaccagttggatagtagcagcagaggaaggggagactatgattctgaaggacctg
agcggctctcagatgcttgaagttcagctggttctgagagaagctctccaaaatgtttgg
acgcagcctcttgaagacagtgaggtagtggtgaaaaaagtgagtccacaacagcgtagg
cttctggaaaactcttcttatgactactgccggaaggagctgattctcatgtctgcccgg
ggctttaccaaccttttccagatacttgttaaagctaaaaagccgctggtgggacataac
atgttcatagacctctgtcatcttcatgacaagttctacaagccccttccagaaagctat
gaggagtttaaaaggaatattcacaacctgttccctgtcctcatagacaccaagaccata
acaaaatccatctggaagaattatcagtttcctcgagtatctactcttttggatgtgtat
gaggttttgtgcagcagcaacctgaaccccacggatccaacgggcccagtgattgctctc
gcaagtgactgttcacgatacgctgagaagaaatctcctcatgaagcaggctatgatgca
tttctctgtggttcagttcttctgaagtcagctcatttactactacgcagagtgacaaaa
tgtagtgatacagtggaggctgatccttctttctctcagtatctcactgtgttagccgag
tacctgaacaaggtgaatttcatccgaggtggtgcctcaagcattaatttttctggggaa
gatgttcccagccagcatccccctctcttggttgtccgtgtccgaggctggccacagatg
aatgaaaggcagatttaccaggagttaaaagctctttgtcgctttgatgtcagaaggcta
tcagggaaccagttcattttgctctccaataaatttaagcacgtcaggcttgttctacgc
gattataaacaccaccctaatctgcagatctctgtctatcgccactggaggcactctccg
catgtgaactgcttgttgcaagtctctggtatcgtggcactgtggtctctcttggccttt
gtactcggaggacctccttgctcttcatag
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