Acidithiobacillus caldus ATCC 51756: Acaty_c1598
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Entry
Acaty_c1598 CDS
T03561
Name
(GenBank) RecD-like DNA helicase YrrC
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acz
Acidithiobacillus caldus ATCC 51756
Pathway
acz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Acaty_c1598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acz03400
]
Acaty_c1598
Enzymes [BR:
acz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Acaty_c1598
DNA repair and recombination proteins [BR:
acz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Acaty_c1598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
nSTAND3
AAA_29
HHH_2
UvrD-helicase
AAA_16
RsgA_GTPase
T2SSE
AAA
NTPase_1
SLFN-g3_helicase
AAA_22
NACHT
MeaB
DEAD
PIF1
AAA_28
ABC_tran
ABC_ATPase
cobW
CbiA
PhoH
AAA_23
TsaE
ATP_bind_1
AAA_7
AAA_5
UvrD_C
RuvB_N
SMC_N
AAA_14
MobB
AAA_3
TrwB_AAD_bind
MMR_HSR1
SRP54
Motif
Other DBs
NCBI-ProteinID:
AIA55462
UniProt:
A0A059ZZW7
LinkDB
All DBs
Position
complement(1636663..1638804)
Genome browser
AA seq
713 aa
AA seq
DB search
MLGGLIERVTFHNEGNGFCVLRVKARGHRELVTVVGHAAAVTAGEWITASGIWVTDRDHG
QQFKAAFLKTSAPTSLEGIEKYLGSGMIRGIGPVYAKKLVRAFGDQVFTVIEEQPERLAE
VEGIGPIRRERMVSAWADQKVIREIMLFLHTHGVGTARAVRIFKTYGTDAVRVMTENPYR
LARDIHGIGFRTADEIARKMGIERDAPIRVRAGISYALMEARDEGHCGLPREALIPLAEK
LLEVSTTAIESAIQEELLDGAIVADRVQDAECVFLASLYRNEQGIAELLHQLRTGSAPWA
GIAADAAIGWVQNRLGIALAESQQSAIRMVLREKVALITGGPGVGKTTLVNAILHILDAK
RLRIALAAPTGRAAKRMSETTGKEAKTIHRLLEINPQGGGFKRKEDYPLDIDLLVLDECS
MIDVPLMHAILRALPRSAGLLMVGDPDQLPSVGPGQVLADLIAAKTIPEVHLTEVFRQAA
QSRIIQAAHRINAGYIPDLSKPEGQSDFYFIAADDPAEASDKLVKLVTTHIPCRFGLDPV
QDIQVLCPMNRGALGARALNDALQSALNGDSTPVVEKFGRRFAPRDKVMQIQNDYEKEVF
NGDIGTVQDVDIEEGALTVDFEGRIVSYGFGELDLLQPAYAITVHKSQGSEYPAVVIPMS
TQHYPMLQRNLLYTAVTRGKALVVLLGQKKAVAMAARNGSGRRRWSKLWEWMR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgctcggtggattgatcgagcgggtcaccttccacaacgagggtaatggattctgcgta
ctgcgggtcaaagcccgcggccatcgggaactggtcacggtggtcgggcatgccgctgcg
gtcaccgcaggggaatggatcaccgcctcgggcatctgggtcaccgatcgggaccatggc
cagcaattcaaagcggcctttctgaaaacctctgcgccgaccagcctggaggggatcgag
aagtatctgggttcgggcatgatccgcggaattggcccggtctacgccaaaaaactggta
agagcctttggcgaccaggtcttcaccgtcatcgaagagcagccagagcggttggccgag
gtagagggcatcggccccatccgccgggagcgtatggtcagcgcctgggcggaccaaaag
gtcattcgcgagatcatgctctttctgcatacccacggggtgggtaccgctcgggcggtc
cgcatcttcaagacctatggcaccgatgcggtgcgggtcatgaccgaaaatccctatcgg
ctggcccgggatattcacggaattggattccgaacggctgacgagattgccagaaaaatg
ggcatcgaacgcgatgccccgatacgggtccgggcgggcatttcctatgccctgatggag
gcgcgggatgagggccactgcggattgccccgggaagcactcattccacttgccgaaaag
ctattggaagtctcgacgacggccatcgaaagcgccattcaggaagaattgctggatggg
gcaatcgtcgccgatcgggtgcaggacgcggaatgcgtttttctcgcttcgctgtaccgg
aacgagcaggggatagccgagctcctgcaccaactccgtaccggttcggccccctgggca
ggtattgccgcggatgcggctattggttgggtgcaaaatcgtttgggcattgcgctcgcg
gagagccagcaatccgccatccgcatggtactccgggaaaaggtggccctcattaccggt
ggccctggggtgggaaagactaccctcgtcaatgccatcctgcatattctcgacgccaag
cgactgcgcattgccctggccgcaccgactgggcgtgcagccaagcgcatgagcgaaacc
accggcaaagaagccaagacgatccaccggctcctggagatcaatccccagggaggggga
ttcaagcgtaaggaggattatcccctcgatatcgatctgctggttctggacgaatgctcc
atgatcgacgtaccgctgatgcacgccatcctcagggctctaccccgaagcgcagggctc
ttgatggtcggtgaccccgatcaattgccttcggtggggcctggtcaagtactcgccgat
ctcattgcggccaaaaccatccccgaggtccatctgacggaagtctttcgccaggccgcg
caaagccgaattatccaggcagcccatcggatcaacgccggctacataccggacctgagc
aagccggaggggcagagcgatttctacttcatcgccgcggacgatccagccgaggcctcc
gacaagctcgtcaagctggtcaccacccatatcccttgccgcttcggcctagaccccgtg
caggacatccaggtgctgtgccccatgaatcgcggtgcactcggagctcgggcgctcaac
gatgcgctgcaatctgccctcaacggcgacagcacgcccgttgtcgaaaagtttggccgt
cgcttcgcaccaagggacaaggtcatgcagatccagaacgactacgagaaggaggtattc
aacggtgacattggcactgtgcaggacgtggatatcgaggagggcgccctgaccgtagat
ttcgaaggtcggatcgtcagctatggatttggcgaattggacctgctccagcccgcctat
gcgatcaccgttcacaaaagccaaggttcggagtaccctgccgtggtgatccccatgagc
acgcagcattaccccatgctgcagcgcaatctgctctacacggcggtgacgcggggcaag
gccctggtcgtgctcctggggcagaagaaagccgtggccatggccgcccggaatgggtcc
gggcgacggcggtggtcaaagttgtgggaatggatgcggtag
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