Abiotrophia defectiva: FOC79_08205
Help
Entry
FOC79_08205 CDS
T06623
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
adc
Abiotrophia defectiva
Pathway
adc03030
DNA replication
adc03430
Mismatch repair
adc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
adc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOC79_08205
03430 Mismatch repair
FOC79_08205
03440 Homologous recombination
FOC79_08205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
adc03032
]
FOC79_08205
03400 DNA repair and recombination proteins [BR:
adc03400
]
FOC79_08205
Enzymes [BR:
adc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOC79_08205
DNA replication proteins [BR:
adc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOC79_08205
DNA repair and recombination proteins [BR:
adc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOC79_08205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QKH47578
LinkDB
All DBs
Position
1782112..1785462
Genome browser
AA seq
1116 aa
AA seq
DB search
MLFNVHSANSLLASTLTIPSYVEAAKERGYQILGLADVHSLQGALDFYNRCQAAGLKAMI
GATIKLPGALKQTQVYPFLVYALNQAGYYELIGLIRRLSHQPLSPGAIWDYLTQSCHNLF
YISCGHASEVEQTLIHSGDQEASLVLERLEQVFGPGNVYLGVAAFPYNPVEGEALKAFAK
AYQVPLVVGQGVSTLNQGDAFSLKVLEAIGANETLDVELRAMQGVHYVYNWADLEAQYVR
LGLADCLTNSRQLADRMQVSLPQNQAFLPKFPTPDHLPASQFLRDLTQSALEDLRPADLA
VYQQRLDYELEVIDSMGFSDYFLIVWDIIVYCQSHAIRVGPGRGSAAGSLVSYLLGITRV
DPIQYNLLFERFLNPERYNMPDIDMDIPDNKRQQVLHYVVERYGQEQVAQIATLGTFGAR
AAMRDTLRVLGADSETLRVWARAIPKELDISLPQAYQKSAALRQLVSQSETNQQLFQVAQ
TIEGLPRHISTHAAAVVIHDQALDQVIPVVERPNQPLMTQFTMYDVEKVGLLKMDFLGLR
NLNLLDTIIKQVQKSQADFDIEAISMEDAQTLALFRAADTNGVFQFESDGIKQVLRKLQP
ERFEDIVAVNALFRPGPMKQIDHYVARRHGKESYQAIHPILEEILAPTYGIIVYQEQVMQ
VCQRMAGFSLGQADLLRRAMGKKQADVMAREREHFIRGAREQGIEPEIASATYDYIYEFA
SYGFNRSHAVVYSTLAFQLAYLKVHYPLAFYQALLNMGSSNQTTMADYILEAKRHTGPLL
GLNLNESQIGFSVSGQQLQVGLSAIRTLRHDFVSHIVEDRQLLGPYTGLLHFMQRLPKKW
LKHEWLESLISVGAFDYTGMNRPTLLKNLDKLMQSVTFSGGNLSLFPELEPRIEWVEDWN
PSQKRDKEVEILGFSLEGHPVATYQAFAKSHPNLLSVRDILAAQPNLKVQTLVLVKGIRV
INTKKQELMAFLELEDEVASISGVVFPQSYRHYVSLLKEGQVLLVEGTVELDRQGRHQLI
IKRLSPVNEQEAKAPNSPNEHPFQRCFVQVKAFQDLKPFLPGLRKFADQYSGPVAMILVD
GNRQTFQLDDAYRVSYGQKAQAELAKLLTPFKIIYK
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgctatttaatgttcattctgccaattcattactcgccagcaccttgacgattccgtcc
tatgtggaagcagctaaggaacggggctatcaaatcctgggtttagcagatgttcacagc
ctgcaaggggcgctagacttctataatcgttgtcaggctgctggtctcaaggccatgatt
ggggcgaccattaagctgcctggggctcttaagcaaacacaagtttatcccttcctagtt
tatgccctcaatcaagcaggttattatgaattaattggccttattcgacgcctgagccat
cagcccctgtcgccaggtgctatttgggattatctgacccagtcctgccacaatttattc
tatatctcttgtggccatgccagcgaagtggaacaaaccttgattcatagtggtgaccaa
gaagctagcttagtcttagaacgcttggagcaagtctttgggccaggcaatgtctatctg
ggggtagcggctttcccttataatccagttgaaggtgaggcccttaaggcctttgctaag
gcttatcaagttccgctagtagtggggcagggggtctcgaccttaaatcaaggcgatgcc
ttcagtcttaaggttttagaagctattggggctaatgagaccttagacgtggaattacgg
gccatgcaaggggtccactatgtctataattgggcggatttggaggcccagtacgtccgt
ttgggcttagctgactgtttgactaatagtcgccaactagcagaccgtatgcaggtatcc
ttgccacaaaatcaggcctttctgccaaaatttccgacgccagaccacttgccagctagt
caattcttgcgagacttaactcagtcggcattagaagacttgaggcctgctgatttggcg
gtctaccagcagcggcttgactatgagctagaagttatcgatagtatgggctttagcgac
tatttcctcattgtctgggatattattgtttactgccaaagtcacgccatccgagtaggg
ccaggtcggggttcggcggctggctccttagtttcctacctattagggattacgcgcgtc
gatcccatccaatacaacttactctttgagcgtttcttaaatccagagcgctataatatg
cccgatattgatatggatattcccgataataaacgccaacaagttttgcattatgtggtc
gagcgctatggccaagagcaggtcgctcaaattgccaccttgggaaccttcggggctcga
gccgccatgcgggataccttacgagttctaggggcggatagtgagaccttacgagtctgg
gcgcgcgccataccaaaagagttggacattagcttgcctcaggcctatcagaagtcggct
gccttacgccagttagtcagtcaatcagagaccaaccagcagctcttccaagtggcgcaa
accatcgagggcttgccgcgtcacatttcaacccatgccgcggcggtggtcattcatgac
caagccttggatcaggttattccagtcgtagaacgacctaaccaacctcttatgactcaa
tttaccatgtacgatgtggagaaggttggcctgcttaagatggacttcctaggcctgaga
aacctcaacctgctagataccatcattaagcaggttcaaaagagccaagctgattttgat
attgaagcaatttccatggaagatgctcaaacgctggccctcttccgggcggcggatact
aatggggtcttccagtttgaatcagacggcattaagcaagtcctacgcaagttgcaacca
gagcgctttgaagatatagtagccgtcaacgcgctcttccgtccgggaccaatgaagcag
attgaccactatgtagcgcgtcgtcatggcaaggaaagctatcaggctatccatcctatc
ctggaagaaatcttagcgccaacctatggcatcatcgtctatcaggaacaagtcatgcag
gtctgtcaacgtatggccggtttcagcttaggacaggccgacttgctaagacgggccatg
ggtaaaaagcaagccgatgtcatggcgcgagaacgcgagcatttcattaggggggctaga
gagcaggggatagaacctgagattgcgtcagctacctacgactatatctatgagtttgcc
agctatggcttcaaccgctcgcacgcggtggtctattcgaccttagccttccaactggcc
tatctcaaggtccattaccctctagctttctaccaagccctcttgaatatgggcagttcc
aaccagacgaccatggccgactatattctggaggccaaacggcatacaggtccactcctt
ggcctcaatctcaatgagagtcagataggctttagtgtcagtggacagcaactccaagta
ggtctctcagccatccggaccttacgccatgactttgtcagtcacatagtagaggatcgt
cagctcttaggaccttacaccggcctcttgcattttatgcagcggctacctaagaaatgg
ctcaagcacgagtggctagaaagtctgattagtgtaggggcctttgactatactggcatg
aaccggccaaccttgcttaagaacctagacaagctcatgcaaagtgtcaccttcagtggc
ggtaatttgtcgctctttccagagctagagccacgaattgaatgggtggaggactggaac
cctagccaaaagcgggataaggaagtggaaatactgggcttctccttagaggggcatcca
gtggcaacttatcaagcctttgccaagtcccatcccaacttactgtcagtaagagatatc
ttagcggcccaaccaaacctcaaggtccaaaccctagtcttagtcaaaggcatccgggtc
attaacactaagaagcaggaattaatggccttcctcgaactagaagacgaagtagctagc
attagcggggtagtcttcccgcaaagctatcgacactatgtctcgctgcttaaggaggga
caggtcttgctagtagaagggacggtcgaattagaccgccaagggcgccatcagctgatt
attaagcgcctgtctccagtcaatgaacaggaagccaaggcaccaaatagcccgaatgag
catcctttccaacgttgctttgtccaggtcaaggccttccaggacctcaaaccttttctg
ccaggcttaagaaaatttgccgatcaatattctggaccggtagccatgattttagtcgat
ggcaatcgtcagaccttccaattggatgatgcctatcgggtctcctatggccagaaagcg
caagcagaattagcaaaactactgactcctttcaaaattatctacaagtaa
DBGET
integrated database retrieval system
