Acropora digitifera (stony coral): 107343707
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Entry
107343707 CDS
T04352
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
adf
Acropora digitifera (stony coral)
Pathway
adf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
adf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107343707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
adf03019
]
107343707
03009 Ribosome biogenesis [BR:
adf03009
]
107343707
03036 Chromosome and associated proteins [BR:
adf03036
]
107343707
Enzymes [BR:
adf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
107343707
Messenger RNA biogenesis [BR:
adf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107343707
Ribosome biogenesis [BR:
adf03009
]
Eukaryotic type
90S particles
RNase
107343707
Prokaryotic type
rRNA processing factors
107343707
Chromosome and associated proteins [BR:
adf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
107343707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
Motif
Other DBs
NCBI-GeneID:
107343707
NCBI-ProteinID:
XP_015764775
LinkDB
All DBs
Position
Un
AA seq
1412 aa
AA seq
DB search
MWGTPPFSPARSMAASGNGSSLQGNQPHFPPRIQQQVIHSVPKQLPRVGAMSSFQHFASS
AELPSPSNPLPVHQISPRDARMTVPHNQPNNNSLMQQPSPRGMASLLQQNSAFKNPLQQV
PSPEVIPHQPRISSRTSSGELVAPMQRSLTETAHRGIMPNTIQSSTFGVVSLPHQASNEP
TLGGVLIRAQQPGTSWAVPSPTRGTLIPPGPFTSTTTPVPTQAQIPLSSQQPFLSPSLQP
STGVPSSQWQMSPQTVLLSGVRQPSSTLPPRQVIPSTMVPTRASHFQAISPGQLVPSTVQ
ATGRMHSLATTPRPIIVPSSMPPNRGINSPAISLRAFVPPTCTAGMNSPTLAPRAMMSTV
QPRSMRPFAPSQRMFMQSSRQPSVGTPSSNLVSTLFTPRNVLNPEGAQSSSPVQMRFSPS
TSLSSGEPLPRGVLHPPQQSLVPATSPQHGSVPPRLRSSPIDTVLPGQSLSPAQPLVLNR
LHFPSGITSPGQQTPLPNDRLQHNTQPFHPRNISTPVQPQLAFGSLQQQLRNPRPSAYGL
NQGFIAPVPQNGTNGLIQQMQPPVASGQRGNVHSSQLPFNQQFNPIAQSTFRRRPTLSAP
HTTTSHSKDGKGRRDHDYRRNYHSSTRETHCFSPPPPDIERVIKYKTSQEYYIKKQNEQE
NKHHVQGTDKLMELHSTFEKEILNMTPLEQTDSDAESIITKGSQQKNIGDSDMDSLIESE
DDDNGSQAKSRLRLFPSDDEGTSDEDSSGIESRTLSDSDNDDDDDDSNAEGGMTDDDLDD
DRHEGCHKGPSVAEIRKRKIEDPRRLHPELWFNEIGETNDGPVCRCSSVDKQRGIRHGVY
PGETAIKLCDPLTNNSDKVHHYWITVTPHTNFMTSNPSVIHAEGKDYTFEGFSMFSHHPL
EKVPICSVIRFNIEYTLHIVSQPIPESFCMKDLDLFSKFLFHQVLELADWNFNGNIDDSC
QRYHFMPRFVHRSTRRDANQELMCSFWQLNHFDLSEEKWEEYSKSCMNFIVMNPAKKPGA
IRVDNLRFSKADKDESSKGKEYPNIIHHSIRPVQMSFAGDPKYQKLLRTHNKLRNLISNT
PVPSRKNQDKLVKLKIELEKMRLKSSMRRDTVVEISSKGMIKTGLKSDICQHALLLPVIV
HHVRYHQCLHSLDKKVGYVFKNRALLQLALTHPSYYLNFGLNPDHARNSLTNCGVKKPRY
GDWKVRHLHTRKKGITQLIRVMSNLGKMEEHQSMIRHNERLEFLGDAVLELICSAHLYFM
LPCKSEGALAMYRSALVQNKHLAQLAQKLGLSDFMQYSHGPDLCLEEDLKHAMANCFEAI
LGAIYLEGGLKPATELFTKLTFDDEELRDVWTNLPKHPLQARQPDGDRHLIASSELLQVL
ILFSLCVFLCLLIPTFALIPKWLECTAGPYVP
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaactcctcccttttcacctgccaggtctatggccgcttcgggaaacggttct
tctctccagggaaatcagccgcacttccctccgcgaattcagcaacaagtcatccattca
gttcctaagcaacttccaagggttggagcgatgtcgtcatttcaacattttgcttcttct
gcagagttacccagcccatctaacccacttcctgttcaccagatctcacccagagatgca
cggatgacagttcctcacaatcagcccaataacaattcactaatgcaacagccttcacca
agaggaatggcatctctactccaacagaactcagcttttaagaaccctctacaacaagtc
ccttcacctgaagtgattcctcatcagccaagaatttcttctagaacttcttctggagaa
ttagtggcccctatgcaaagatcattgacagagactgctcacagagggattatgcccaac
acaatacagtcctctacatttggtgttgtgtcattaccccatcaggcatcaaatgaaccc
actcttggaggggtgttaataagagctcagcagccaggcacatcctgggctgtaccttct
cccacaaggggcacgttaattccaccaggaccattcacttccactaccacccctgtcccc
acacaagcacaaattcctttgtcatctcaacaaccctttttgtctccaagcttgcaacct
tcaactggtgttccatcatctcaatggcaaatgtcacctcaaacagtgctactatctggg
gtcaggcagccatcatcaaccttacccccaagacaagtcataccatctactatggtaccc
actagagcaagtcatttccaagcaatatccccaggacaattggtaccatctacagtacaa
gctactggaagaatgcattccctagctacaaccccgagaccaataattgtaccttcatcc
atgccacccaatagaggaattaattctcctgccatttccctaagagcatttgtaccacct
acatgtactgcagggatgaattccccaactttagctcccagagcaatgatgtctactgta
caaccaagaagcatgagaccatttgccccatcccaaagaatgtttatgcaatcaagtaga
caaccttctgttggaactccctcatcaaacttagtttcaacattgtttacaccacgtaat
gtactaaaccccgaaggtgctcagtcttcatctccagtccaaatgaggttttctccttct
acctcactatcctctggggaaccccttcctagaggagtcttgcatcctcctcaacaatca
cttgtaccagcaacatctccccaacatggaagtgtgccaccaagactcagatcctctcct
attgacacagtattacctggacaatctctatcacctgcgcaaccactagttttaaatcgc
ttacattttccttctggaatcacatcacctggtcagcagactccacttcccaatgataga
ctgcagcacaatactcaaccatttcatccaagaaacatttccactccagtgcaaccacag
ttagcttttggcagcctgcagcaacagctaagaaatcctcggccctctgcttatggcctc
aatcaaggcttcattgctcctgtaccacagaatggtactaatggacttatacagcagatg
cagccaccagttgcatctggtcagagagggaatgttcattcatcacagcttccttttaat
caacaattcaaccccattgcacaatcaacttttcggagaaggccaaccctgtctgctcca
cacacaacaacaagtcattctaaagatggcaagggaagaagagatcatgattacaggagg
aattatcacagcagtaccagagaaactcactgtttttctcctccacctccggacattgaa
agagtgataaagtataagacatcacaagagtattacatcaagaagcaaaatgagcaggaa
aacaaacaccatgttcagggaacagataaactaatggaattgcacagtacctttgaaaag
gaaatattgaacatgacacccttggaacaaactgatagcgatgctgaaagcatcatcacc
aagggaagtcagcagaaaaatattggcgacagtgatatggattcacttattgagagtgag
gatgatgacaatggcagccaagcaaagtcaaggctacggctatttcctagtgatgacgaa
ggaaccagtgatgaggacagcagtggcatcgaaagtcgtactttgagtgacagtgataat
gatgatgatgatgatgatagtaatgcagaagggggaatgactgatgatgaccttgacgat
gacagacatgaaggttgccataaaggacctagtgtggcagagataaggaagagaaaaata
gaagatcccagacgacttcatcctgaactttggtttaatgagattggggagacaaatgat
ggcccagtctgtcgatgtagttcagttgacaagcaacgtggaatacgtcatggagtttat
cccggtgaaactgcgatcaaactctgtgatccattgacaaataacagtgataaagttcat
cattattggataactgtcacacctcacacaaactttatgacatcaaatccaagtgtcatt
catgccgagggaaaagattacacatttgaaggcttctcaatgttttcccatcaccctcta
gagaaagtaccaatctgttctgtgatccgattcaacattgaatacacccttcacattgtc
agtcagccaataccagagagtttctgtatgaaagatcttgatttgttttcaaagtttctt
tttcaccaagtgctagagcttgctgactggaactttaatggaaatattgacgattcctgt
caacgttaccacttcatgccaagatttgtacatagatccacacgacgggatgctaatcaa
gaactgatgtgttccttttggcagttgaaccattttgatctgagtgaagaaaaatgggaa
gagtatagcaagtcatgtatgaacttcattgtcatgaatccggccaagaaacctggagct
attcgggttgacaatctacgattttctaaggcggacaaagatgaatctagtaaaggcaag
gagtacccaaatattatccatcacagtatcagaccagtacagatgagctttgcaggagat
ccaaagtatcaaaaacttttgagaactcacaacaaactaaggaatctcatctctaacacg
cctgtaccaagtcgtaagaatcaggataaactagtcaaactgaagattgaattggaaaag
atgcgtctcaaaagctccatgcgtcgtgatactgtggtagaaattagcagcaaaggcatg
atcaaaacaggattaaaatcagacatttgtcagcacgcccttctgcttcctgtgatagtt
catcacgttcggtatcaccagtgtctgcactcgctcgacaaaaaagtgggctacgtgttc
aaaaatcgggccttacttcagcttgccctgactcatccatcatattacctcaactttggc
ctgaacccagaccacgcgcgaaattcccttacaaactgcggagtgaaaaagccacgatac
ggagactggaaggtgcgacatttgcacacgcgcaaaaaaggtatcactcagctcattcgc
gtcatgtcaaaccttggaaaaatggaagaacatcagtccatgattcgtcacaatgagcga
cttgaatttcttggggatgctgtcttggaactaatttgcagtgctcacttgtatttcatg
ctgccgtgcaaatcagaaggcgcattggccatgtaccgctcagctctcgtacaaaacaag
catctggctcaactggcacagaaattaggcttgtcggatttcatgcagtactcgcacggc
cctgacttgtgtttggaagaagacctcaaacatgccatggcgaactgctttgaagctata
ctgggggcgatataccttgaaggtggattaaaaccagctacagaactatttactaaacta
acctttgacgacgaggaactaagagacgtctggacaaatcttcctaagcatcccttacag
gctcgccagccagatggtgacaggcacctgatcgcgtcctcagaacttcttcaggttctg
attttgttttctctctgcgtttttctatgtctactgattcccacgtttgccctgattccc
aagtggttggaatgcactgcagggccttatgtcccgtga
DBGET
integrated database retrieval system
