Ammonifex degensii: Adeg_0089
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Entry
Adeg_0089 CDS
T00994
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
Organism
adg
Ammonifex degensii
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_AsnC-type
HTH_23
DUF134
HTH_24
HTH_3
HTH_28
HTH_Tnp_ISL3
GerE
HTH_16
TnsD
AAA_16
TPR_12
HTH_30
HTH_38
baeRF_family8
HTH_10
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
ACX51265
UniProt:
C9RAI8
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Position
complement(80241..80888)
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AA seq
215 aa
AA seq
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MAETRHLLEQARAGSHQAFEELVLAYQDRVYGLCYRLTGNHDDAEDLAQEVFVRAYRGLR
SFRAEADFGTYLHRIAVNLFLNHRRKANHNTLSLDDPVSVPDGELPRQVADGNHLHPEEE
AEKREFIRLVRRALNSLSREHRAVLVLREMEEMSYEEIAAVLGVAPGTVKSRLNRARAAL
QKALIKMAREAGLELLPGEGKVDVLPRGKEVNLGE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaaccaggcatcttctggagcaggcccgcgctggttcccaccaggcttttgag
gaactggtgctcgcctaccaggatcgggtgtatgggctctgctaccggctcacggggaac
cacgacgatgccgaggatctggcccaggaggtattcgtacgggcttaccggggattgagg
agctttcgcgccgaagccgacttcggaacctacctgcaccgcatagcggtgaacctcttc
ctcaatcaccgccggaaagccaaccacaataccctatctctagacgatccagtgtcggtt
cccgacggggagctcccccggcaggtagcggatggaaaccacctgcatccagaagaggag
gccgagaaacgggaattcatccgcctggtacgccgggcgctaaatagtctcagccgcgag
caccgggccgttctggtgctacgcgagatggaagagatgagctacgaggaaattgccgcc
gttttaggtgtggcgccgggcaccgtaaaatcgcggcttaatcgcgcccgcgccgctttg
caaaaagcactcatcaaaatggcccgggaagctggcctagagcttctgccgggggagggg
aaagtcgatgtactgccaagaggcaaggaggttaatctgggagagtga
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