Alloalcanivorax dieselolei: B5T_04377
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Entry
B5T_04377 CDS
T02259
Name
(GenBank) Sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
adi
Alloalcanivorax dieselolei
Brite
KEGG Orthology (KO) [BR:
adi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
adi03000
]
B5T_04377
Transcription factors [BR:
adi03000
]
Prokaryotic type
Helix-turn-helix
Other families
B5T_04377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_30
AAA_5
HTH_50
Mg_chelatase
AAA_16
AAA_2
AAA_3
AAA
HTH_7
HTH_28
HTH_1
HTH_23
AAA_7
HTH_29
MCM
RWP-RK
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AFT72637
UniProt:
K0CLH8
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All DBs
Position
complement(4843132..4845018)
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AA seq
628 aa
AA seq
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MQINPFDFDHRVQKARQLFEEGRDVPPQLLEDSVVRSWQRSRHHGLCPEDRVIFNVVSRN
DVRRIGEHHHLLLDDVAPEMELLFHSLGRANWILACIEAGGVVIHALGNTNPACRDLAPA
LRIGVNLNESVAGTNGPGCALAEGRPSVVCGSEHFLDEARVFACAAVPLRDPYGELVAVL
DASRRHGGHRIGILEPVALAVRAIENRMMRRIGGELRLAVHYRPELTDSPMRGLLHFDGD
GRLLGANPVARQMLDLPVGDGDGRLCFEALFEGSMARVWAARDMPVALACHGGLQLFCRL
EGRRPFRFNGFSPPDSPPARQQDPQAPFHGDPGVTGLLRQAQRAFHHDLPVLLRGETGTG
KEVMARWLHRSGPRAEGPFVAVNCSSIPAGLIESELFGYEGGAFTGARKGGMPGKFEQAD
GGTLFLDEIGDMPLELQARLLRVLQEREVTRLGATRGIAVQCSLICATHRDLEQRVAEGL
FREDLLYRINGLQMPLPPLRQRQDFDDLVRHLLVGEAGHEAPPVLSEAAWAALRGHSWPG
NIRELQQALKLAVALSENGTVTVEHLPASLQTPSVPLSTRPSGTLQRAECETVRAALARH
KGNVSAAAKDLGIARATLYRKMRQFGLD
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaacccgttcgacttcgatcaccgtgttcaaaaagccagacaattgttcgag
gaaggccgggatgtgcctccccagttattggaagattcggtggtgcgttcctggcagcgt
tcacgtcatcacggtttgtgccccgaagaccgggttatttttaatgttgtttcccgtaat
gacgtgcgccgcattggtgagcatcaccatctgctgctggatgacgtagcgccggaaatg
gaactcttgttccattcactggggcgcgccaactggatcctggcttgtatcgaggcgggg
ggcgtggtgattcatgccctgggcaacactaacccagcctgtcgtgatctcgccccggcg
ttgcgcatcggggtcaatttgaatgaatccgtggccggtaccaatggtccggggtgcgcg
ctggcggaagggcgcccctcggtggtatgcggcagtgagcattttcttgatgaggcccgt
gtgttcgcctgcgctgccgtgccgcttcgcgacccttacggtgagctggtggcggtgctg
gatgcatcccggcgtcatggtggtcaccgtattggcatcctggagccggtagcgttggcc
gtgcgggcaattgagaaccgcatgatgcggcgtattggcggcgagctgcgactggcggtc
cattatcgtccggaactgaccgattcgccgatgcgcgggctgctgcactttgacggtgac
ggccgtctgctgggcgccaacccggtggctcgtcagatgctcgatctccccgtcggtgac
ggtgatgggcggctgtgttttgaggcactgttcgaggggagcatggcgcgggtctgggcc
gccagggacatgccggtggcacttgcctgtcacggcggcttgcaattgttctgtcggttg
gagggacggcgaccgttccgattcaatggcttctccccgccggactcgccgccggcgcgt
caacaagacccacaagcgccgttccacggtgatcccggtgttaccggcttgttgcgccag
gcccagagggcttttcaccatgatctgccggtattgttgcggggcgagaccggtaccggc
aaggaggtgatggcgcgctggctgcatcgttccgggccgcgcgccgaagggcctttcgtg
gcggttaactgctcgtcgatccccgccggcctgattgaatccgagctgttcggctacgaa
ggcggcgcttttaccggtgcgcgcaaaggcgggatgcccggtaaatttgagcaagccgac
ggcggcacgctgtttctggatgaaattggcgatatgccgctggaattacaggcgcgtctt
ttgcgggtattacaggaacgggaggtcacccgattgggcgctacccgtggcatcgcggtg
caatgttcgttgatttgcgccacccaccgggacctggaacaacgggtggcggaagggctg
ttccgtgaagacctgttgtatcgcatcaatggtttacagatgccgctgccgccgctgcgc
cagcgccaggatttcgatgatctggtgcggcatctgctggtcggagaagcgggacatgag
gcgccaccggtgctgtccgaggcagcctgggcggccctgcgtggccactcctggccgggc
aatattcgcgagttgcaacaggccctgaagctggcggtggcgttatccgagaatggaacg
gtgacggtggagcatctgccggcttcgctgcagacgccatcggtaccattatcaacgcgc
ccatcgggcaccttgcagcgggccgaatgtgaaacggtgcgagcggcgctggcgcggcac
aaaggcaatgtttccgccgccgcgaaggatctcggcatcgcccgggcgacgctataccgg
aaaatgcggcagttcggcctggattga
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