KEGG   Altererythrobacter dongtanensis: A6F68_01381Help
Entry
A6F68_01381       CDS       T04466                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ado  Altererythrobacter dongtanensis
Pathway
ado03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ado00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A6F68_01381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ado03400]
    A6F68_01381
Enzymes [BR:ado01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A6F68_01381
DNA repair and recombination proteins [BR:ado03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A6F68_01381
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: ANY19897
UniProt: A0A1B2ACN1
LinkDB All DBs
Position
complement(1414966..1417482)
Genome map
AA seq 838 aa AA seqDB search
MARRDPLSEYNAKRDFGKTPEPAGKAESSAGGDLFIVQKHDATRLHWDFRIEVDGVLKSW
AVTKGPSPDPDIKRLAVRTEDHPMSYAEFEGTIPKGEYGGGTVMLWDRGTWAPIAGKSAK
DLDKGHLHFTLDGERMKGEWLLIRLKPRPGEKRENWLLRKIADEHAQEGDGLVERELTSV
LTGRSMAEIAADKAGEYSLAGKKDDAFLAQMEKAAAHNAGKSRKRKAGRSAPLPKFRKPQ
LATLVDDVPSGNRWMHEIKFDGYRALVAVKGKDVRVYTRNGKDWTDKFSPLVKAIAALDL
PPSLIDGEIVATDGDGNPSFSALQAVLKRGHGAQKAGDALEFHAFDLLELGGEDLAALPN
IERKERLEALLGTADAPIHVADHVIGAGEKLYRTMCDAGQEGIISKTIDGTYASRRSKSW
VKVKCTRRQEFVIVGWKKSSAKGRPFASLLLAQNEGDKLVYKGNVGTGFDATTMDDLAKR
LRPLERKTAPVEVDRTSARGVTWVSPKLVAEIAFAEFTADGNVRHGSFVGLRGDKKSADV
VPEKAAPAPEEDEPVAISSRERVIFPDSGQTKGDLADYYAAVAPIMLPFAARRPISLVRC
PQGRAKKCFFQKHDSGSFGDAVHHVPIREKDGGSEDYLYVEDLRGLLQCVQMGTIEFHGW
AARSDAVEMPDRMIFDLDPDEGLGFDDVKTAATDIRDRLADMGLVSFAMLSGGKGVHVVV
PLSTGHSWDEHKDFARHFAEALSLAEPDRFVATMSKAKRKGKIFIDWLRNQRGSTAVLPY
SARARSGAPVAVPIAWNELKTMDNAHPFSIDDAKRLLDRAGSKALAGWGFAEQSLPEY
NT seq 2517 nt NT seq  +upstreamnt  +downstreamnt
atggcgcgccgcgaccccctgtccgaatacaacgccaagcgcgacttcgggaagacgccc
gaaccggcgggcaaggccgagagcagcgccggcggcgaccttttcatcgtccagaagcac
gatgcgacccgcctgcactgggactttcgtatcgaggtcgatggcgtgctgaaaagctgg
gcggtcaccaaagggccctcgcccgaccctgacatcaagcggctcgcggtgcggacagag
gatcacccgatgtcctacgccgagttcgaaggcacgatcccgaagggcgaatacggcggc
ggcacggtgatgctgtgggaccggggcacatgggcgccgatcgcggggaaaagcgcaaag
gacctcgacaaggggcacctgcacttcacgctcgacggagaacggatgaagggcgagtgg
ctgctgatccgcctcaagccgcggcccggcgagaagcgcgagaactggttgctgcgcaag
atcgccgacgaacacgcgcaggaaggcgacggccttgtcgagcgcgagctcaccagcgtg
ctgaccgggcgatccatggcagagatcgcggccgacaaggccggcgagtactcgctcgcc
ggcaagaaggacgacgctttcctcgcccagatggaaaaggcggcggcgcacaatgcgggc
aagtcccgcaagcgcaaggccggtcgatcggcgcccttgccgaagttccgcaagccgcag
ctggccaccctggtcgacgacgtgccgtccggaaaccgctggatgcacgagattaagttc
gacggataccgcgcgctcgtcgcggtcaagggcaaggacgtgcgcgtctatacccgcaac
ggcaaggactggaccgacaagttctccccgctcgtgaaggcgatcgccgcgctcgacctt
ccgccctcgctgatcgatggcgagatcgtcgccaccgacggcgacgggaaccccagcttc
tcggcactgcaggccgttctcaagcgcgggcacggtgcccagaaggcgggcgatgcgctg
gaattccacgcgttcgacctgctcgagcttggcggagaggaccttgccgcactgcccaac
atcgaaaggaaggagcgtctcgaagcgctgctcggcaccgccgacgcgccgatccacgtc
gccgaccacgtcatcggagcgggcgagaagctctatcgcactatgtgcgatgcgggacag
gaagggatcatctccaagacgatcgatggaacttacgcgagccgccggtcgaaatcctgg
gtgaaagtgaaatgcacccggcggcaggagttcgttatcgtcggctggaagaagtcgagc
gcgaagggccgcccgttcgcgtcactgctcctcgcccagaacgaaggggacaagctcgtc
tataaaggcaacgtcggcaccggattcgatgcgacgacgatggacgacctggcgaagaga
ttgcggccgctcgaacgcaagaccgcgccggtcgaggtcgacaggacttcggcgcgcggg
gtaacctgggtgtcgcccaagctcgtcgccgagatcgcattcgccgaattcaccgccgac
ggaaacgtgcgtcacggcagcttcgtgggattgcggggcgacaagaagtcggccgatgtc
gtgcccgagaaggcggcgcctgcgcccgaggaagacgagccggtcgcgatttccagccgc
gagcgcgtgatatttcccgacagcggccagaccaagggcgatctggccgactactacgcg
gccgtagcgccgataatgctgccgttcgcagcgcgccgccccatcagcctcgtccggtgt
ccgcagggccgcgcgaagaaatgcttcttccagaagcacgacagcggcagtttcggcgac
gcggtgcaccacgttccgatccgcgaaaaggatggcgggagcgaggactacctctacgtc
gaagacctgcgcgggctcctgcaatgcgtgcagatgggcacgatcgaattccacggctgg
gctgcgcgcagcgatgcagtggaaatgcccgaccggatgatcttcgacctcgacccggac
gagggtctcgggttcgacgacgtgaagaccgcagcgaccgacatccgcgaccggctcgcc
gatatgggcctcgtcagcttcgcgatgctgtcgggcggaaagggcgtgcacgtcgtcgtg
ccgctttcgactggccattcatgggatgagcacaaggatttcgcgcggcacttcgccgaa
gccctgtcgctcgccgagcccgatcggttcgtcgcgacgatgagcaaggccaagcgcaag
ggcaagatcttcatcgactggctgcgcaaccagcgcgggtcgaccgcggtcctgccctat
tcggcccgcgcacgcagcggcgcaccggtcgcggttccgatcgcatggaacgagctcaag
acgatggacaacgcccaccccttcagcatcgacgacgcaaagcgcctgctggaccgtgcg
gggtccaaggccttggccggatggggcttcgccgagcagagcctgcccgagtactga

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