Achromobacter denitrificans: APT56_17960
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Entry
APT56_17960 CDS
T04244
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
adt
Achromobacter denitrificans
Pathway
adt03420
Nucleotide excision repair
adt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
adt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APT56_17960
03430 Mismatch repair
APT56_17960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
adt03400
]
APT56_17960
Enzymes [BR:
adt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APT56_17960
DNA repair and recombination proteins [BR:
adt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APT56_17960
MMR (mismatch excision repair)
Other MMR factors
APT56_17960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
ALX84922
LinkDB
All DBs
Position
complement(4027739..4030030)
Genome browser
AA seq
763 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMSDFERDYAHGTVIRLEQNYRSYGHILDSANALIGHNSGRLG
KNLWTDQGEGEPVRVIEQPSDGMEAQWIVDEIRSLIHEGSLRREIAVLYRSNAQSRVIEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LADAARAHDSSLYSAVALVAGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPDQDTSSTLMPGVVDAAPVV
SDGLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEQSGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLTPSLSAGGGWNGNRGDAFGRKPTNTIAPRQPRGTASGVTVGDKQYRVGQGVHHA
RFGDGTIVSLSGAGQDAQAEIHFRDVGSKTLALGIAKLDIVQG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaagctcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggccgtcacgttcaccaac
aaggccgcccgcgagatgctggcgcgtatgtcggccatcctgccgatcgatacgcgcggc
ctctggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcatcgcgac
gccggcctgccgcagaccttccagatcctcgacgtcaccgaccagctcgccgccatcaag
cggctgatgaaggccaacggcgtcgacgacgaaaaatacccgccgcgcgacgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgccccgccgacgtcgaagcctatgacgcg
caccgccgccgcctgatcgagatctaccagctctacgaagcccagtgccagcgcgaaggc
gtggtcgacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaacgcgccg
gtgcgcgagcactaccagcgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcagtacaagtggctgcggctgctggctggcggcggcgcggcgatcttcgcc
gtgggcgacgacgaccagtccatctacgcgttccgcggcgccaacgtcggcaacatgtcc
gacttcgagcgcgactacgcgcacggcaccgtcatccgcctggagcagaactaccgttcg
tacggccacatcctggattcggccaacgcgctcatcggccacaacagcggccgcctgggc
aagaacctctggaccgaccagggcgaaggcgaaccggtgcgcgtcatcgaacagccctcg
gacggcatggaagcgcaatggatcgtcgacgagatccgttcgctgatccacgaaggcagc
ctgcgccgcgagatcgccgtgctctatcgcagcaacgcgcagtcgcgcgtgatcgaacac
gccatcttctcggccggcattccctacaaagtctacggcggcctgcgctttttcgagcgc
caggaaatcaagcacgcgctcgcctacctgcgcctgatggccaacccgcacgacgacacc
tcgtggatgcgggtggtgaatttccccacgcgcggaattggcgcgcgcacgctggaacaa
ctggccgacgcggcccgcgcgcatgattccagcctgtactcggcggtggcgctggtggcg
ggcaagggcggctccaacctggcccagttcgcccagctgatccatcgcctgatcgaggaa
acgcgcgacctgccgctgcccgaaatggtcgagcacatgctcgaagccagcggcctgaac
gcgcactacaaggccgagcgcgagggcgccgagcgcctcgaaaacctgaacgaactgatc
accgccgcggcggtgttcgcgtccgaggaaaactacgatggcatgcccgctggcgtggtg
cccgaccaggacacctccagcaccttgatgcctggcgtggtcgatgccgcgccagtggtg
tccgacggcctgacgccgctggcggccttcctgtcgcacgccgcgctcgaagccggcgac
aaccaggcgcagcagggccaggacgccgtgcagctcatgaccgtgcacgcggccaagggc
ctggagttcgacgccgtcttcatcaccggcctggaggaaggcctgttcccgcacgagaac
agcatcctggagcaatccggcctggaagaagagcgccgcctcatgtacgtggcgatcacc
cgcgcgcgccagcgcctgtacatcagcctggcgcaaagccgcatgctgcatggccagacg
cgctacgccatgcgttcgcgctttctcgacgaaatccccgagcagcacctgaagtggctg
tcgcccaaggccggcctgacgccgtcgctgagcgccggcggcggctggaacggcaatcgc
ggcgacgccttcggccgcaagcccaccaacaccattgcgccgcgtcaaccgcgcggcacg
gcctccggcgtcacggtgggcgacaagcagtatcgtgtgggacagggcgtgcaccacgcg
cgcttcggcgacggcaccatcgtcagcctgagcggcgcggggcaggacgcgcaggcggaa
atccatttccgcgatgtcggttccaagacgctggctctcggcatcgccaagctggatatc
gttcaaggttga
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