KEGG   Aeromonas sp. ASNIH3: C2U39_05435
Entry
C2U39_05435       CDS       T05427                                 

Definition
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aea  Aeromonas sp. ASNIH3
Pathway
aea03410  Base excision repair
aea03430  Mismatch repair
aea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C2U39_05435
   03430 Mismatch repair
    C2U39_05435
   03440 Homologous recombination
    C2U39_05435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aea03400]
    C2U39_05435
Enzymes [BR:aea01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.-  Acting on ester bonds
    3.1.-.-  
     C2U39_05435
DNA repair and recombination proteins [BR:aea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     C2U39_05435
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     C2U39_05435
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      C2U39_05435
SSDB
Motif
Pfam: DHHA1 RecJ_OB DHH
Other DBs
NCBI-ProteinID: AUV11670
UniProt: A0A2I8QZP4
LinkDB
Position
1088293..1090023
AA seq 576 aa
MPLQIRRRPRVDDSHLPATLHPLLRQIFASRGVEDPALLERSANQLLPPQRLFGMAQAVP
LLAEALTAQKRILIVGDFDCDGATSSALCVLALRAMGGHHIDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPDADAIVNPNQHGC
DFPSKSLAGVGVAFYLMAALNTHLRQSGWYERQGLRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLCAADLGFALGPRLNAVGRLDDMSL
GVACLLCDDINLARQFASEMDSLNQERKEIEQGMQQEALVTLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFEAVIGELVTPELLTGVLLTDGELLPDELTLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLQRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgccaccctg
cacccgctgcttcgccagatcttcgccagccgcggggtagaagaccctgccctgctggag
cgcagcgccaaccagctgctgccgccccagcgtctgttcggcatggcgcaggcggtgccg
ctgctggccgaggcgctgacggcgcaaaaacgcattctcatcgtcggtgacttcgactgc
gacggcgccaccagctcggccctgtgcgtgctggccttgcgcgccatgggggggcaccac
atcgattttctggtgcccaaccgattcgagttcggttatggcctcaccccggagatcgtc
gagctggcggtggcccgcggcgccgagttcctgatcacggtggacaacgggatctccagc
atcgccggggtggcggcggccaaggcggcaggcatgcaggtactggttaccgatcaccat
ttgcccggccaggagctgcctgacgccgacgcgatagtgaaccccaaccagcatggctgc
gacttcccctccaagtccctggccggggtcggggtcgccttctatctgatggcggccctc
aacacccatctgcgccagagcggctggtatgagcgccaggggctgcgcgcccccaacgtg
gcggattacctcgatctggtggccctcggcaccgtggccgacgtggtggcgctcgatggc
aacaaccgcattctggttcatcagggtttgcagcggatccgggccggccgttgtcgcccc
ggcatccaggcgctggtggatgtgtcgggccgcgacggtcgtcgcctgtgcgctgccgat
ctcggctttgcgctggggccgcgcctcaacgcggtgggccggctcgatgacatgtccctc
ggagtcgcctgtctgctctgtgacgacatcaacctggcgcgccagttcgcctccgaaatg
gacagcctcaaccaggagcgcaaggagatcgagcaggggatgcagcaggaggcgctcgtc
actttggagcagatccgttttcgtgacggcgaggtgccctccggcatcgtgctgcaccgg
gatgagtggcatcagggggtggtggggctggtggcctccaaggtgaaggagaagtactac
cgcccggtcatcgcctttgccgagagcagcgagaccgagctcaagggatccgggcgctcc
atcccgggggtgcacctgcgcgatgcgctggaactgctcgatacccgccaccccggcttg
atgggcaagtttggcggccacgccatggcggccgggttgaccctgcccaaggccaatatc
gaggccttcggccgtgccttcgaggcggtcatcggcgagctggtgacccctgagctcttg
accggggtgctgctcaccgacggcgagctgctgccggacgagctcaccctcgagctggcg
gagctgatccgcgcctccggcccctggggtcaggcctttcccgagccgctgtttgacggg
gaattcgtgctggtgcagcagcggctggtgggggagaagcacctcaagatgatgctgacc
acggattccggccacgcggtggatgccatcgcctttggcgtcgacttgcagcgctggccc
gatgcctcggtgaagcgggtgcggctggtctaccggctcgacgtcaacgagtggcgcggc
aaccgcagcgtgcagctgctggtggagcatctggaagccgccggcctctga

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