Aeromonas sp. ASNIH3: C2U39_19945
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Entry
C2U39_19945 CDS
T05427
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aea
Aeromonas sp. ASNIH3
Pathway
aea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2U39_19945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aea03400
]
C2U39_19945
Enzymes [BR:
aea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2U39_19945
DNA repair and recombination proteins [BR:
aea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U39_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
Helicase_RecD
SH3_13
UvrD-helicase
AAA_22
AAA_16
nSTAND3
CbiA
AAA_28
NTPase_1
T2SSE
SLFN-g3_helicase
SRP54
TraI_hel_assoc_N
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AUV14204
LinkDB
All DBs
Position
complement(4236586..4238640)
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AA seq
684 aa
AA seq
DB search
MKGETMIERLKALALAGRIRQLDLQFARLVADLGGSPELVLGAALACHELGRGHVCLPLA
MLAQGGDGQGSSRPFGLDPDQSRDLLADLADPASWPALFAASPLVGSEQEEGELPRWPLR
LWGERLYLTRYHDFELGVARHLSALSERTEWPEIAPALSRLFARDYGLVFGALLKARLAP
DFSVRHFVEKYLDLVFPHEVEWPAVETLLKSAQAASELERLDTLVPEALCCNGQKLAAAT
AAARPFAVISGGPGTGKTTTVAKLLAILVETGLQGGKAPAIRLVAPTGKAAARLTESIGA
ALQALDLPPEWVEAIPTEAGTLHRLLGVIPGRSQFRHHRGNPLHLDLLVVDEASMVDLPM
MARLLDALPSHARLILLGDKDQLASVEAGAVLGDICSFIEQGISPAQADWLSRQTGYRLQ
GTPSGASVRDSLCLLSKSWRFDQHSGIGQLARACNSGDGAAVEAVWGAGFGDIRLHPWAG
EAYNALIAEGVAGYGSYLKAARAGEDPAAVFKAFNGFQILCALRDGPFGVTGLNERLELA
LAKAGLIQRDGDWYAGRPVMVVRNDHGVGLYNGDMGLCLPDETGRLKVWFEQPDGTLRAL
LPSRLPPHETVYAMTIHKSQGSEFAHTVLVLPDSPSPLLTRELVYTGITRAKARLDLYGD
RALLAQAVRKKTERYSGLAERLGE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcgaaaccatgatagagcggctgaaagccttggcgctggcggggcgcatccgc
cagcttgacctgcaatttgccaggctggtggccgacctgggcggcagccccgagctggtg
ctgggggccgcactcgcctgccatgagctggggcgcggccatgtctgcctgccgctggcg
atgctcgctcagggcggtgacgggcagggatcctcgcgccccttcgggctggatccggat
cagagccgggatctgctggcggatctcgcggatcccgcgagctggcccgccctctttgcg
gccagccccctggtggggagcgaacaggaggagggagagctcccccgctggcccctgcga
ctctggggggagcgcctctacctcacccgctaccacgactttgagctgggggtggcccgc
caccttagcgccttgagtgaacggaccgaatggccggagattgccccggccctgtcacgc
ctctttgcccgcgactacggcctggtattcggggccctgctcaaggcccgcctcgcgccg
gatttctccgtccgccactttgtggagaagtacctggatctggtcttcccccatgaggtg
gagtggcccgccgtggagaccctgctaaagagcgcccaggcggccagcgagctggagcgg
ctggataccctggtgcccgaggcgctctgctgcaacggccagaagctggcggcggccacg
gcggcggcgcgtcccttcgcggtcatctccggcggccccggcaccggcaagaccaccacg
gtggccaagctcctcgccatcctggtggagaccggcctgcaagggggcaaggccccggcg
atccggctggtggcccccaccggcaaggcggcggcgcgtctgaccgagagtatcggcgct
gccctgcaggcgctggacttgccccccgagtgggtggaggccatccccaccgaggcgggc
accctgcaccggctgctcggggtgatccccgggcgcagccagttccgccatcacagaggc
aacccgctgcacctcgacctgctggtggtggacgaggcctccatggtggacctgcccatg
atggcgcgcctgctggatgcgctgccgagccatgcccgcctcatcctgctcggcgacaag
gatcagctcgcctcggtggaggcgggggccgtgctcggggatatctgcagctttatcgaa
cagggcatcagccccgcgcaggcggattggctctcccgccagaccggctatcgcctgcaa
ggcacgccatcaggggccagcgtgcgcgacagcctctgtttgctctccaagagctggcgc
tttgaccagcattcgggcatcggccagttggcgcgggcctgcaacagcggcgacggggcg
gcagtggaggcggtctggggcgcaggatttggcgacatccgcctgcacccctgggcgggg
gaggcttacaacgccttgatcgcagagggggtggccggttatggcagctacctcaaggcg
gcccgggccggcgaggatccggcggcggtgttcaaggcgttcaacggcttccagatcctc
tgcgccctgcgggacggccccttcggggtgacggggctcaacgagcggctcgaactggcc
ctcgccaaggcagggctgatccagcgtgacggcgactggtatgcgggccgccccgtgatg
gtggtgcgcaacgaccacggggtgggcctctacaacggcgacatggggctctgcctgccg
gatgagaccgggcggctcaaggtatggttcgagcagccggacggcaccctgcgggccctg
ctgcccagccggttgcccccccatgagacggtctacgccatgaccatccacaaatcccag
ggctcggagtttgcccacaccgtgctggtgctgcccgacagccccagcccgctcctgacc
cgcgagctggtctacaccggcatcacccgcgccaaggcccgcctcgatctctacggcgat
cgcgccctgctggcacaggccgtgcggaaaaagaccgagcggtattcgggattggcggag
aggctgggggagtga
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