Alicyclobacillus fastidiosus: NZD89_08495
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Entry
NZD89_08495 CDS
T08690
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
afas
Alicyclobacillus fastidiosus
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS
PAS_9
Mg_chelatase
PAS_7
PAS_8
AAA_2
AAA_5
HTH_30
PAS_4
HTH_50
MCM
AAA_16
AAA
PAS_10
AAA_3
TIP49
ATPase
HTH_28
HTH_29
nSTAND3
AAA_7
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WAH43411
LinkDB
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Position
1716758..1718197
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AA seq
479 aa
AA seq
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MHAIRNSTDVLQLILDTMYEGIVLVDEQGHILEMNQAYLKLLDMERDAVIGRHVTDVIEN
TRMHKVLETGIPERGHLQQLQGHDMIVHRIPIWQDGKMIGALGVLIFESIGELYRIIERT
QEILRSDNAGPSDLRQDVETIPQRRAYTIDETIGQSQSIMLLKQMAKKAAKTPVTVLITG
ESGTGKEVMAQGIHYESNRANGPFVSVNCAAIPENLLETELFGYDDGAFTGAKKGGKPGQ
IELAHMGTLFLDEIGDMPVNMQAKLLRVLEEREIQRVGGITKRYVNTRIISATNRDLEQM
VQKGQFREDLYYRLNIIRLHLPPLRERREDIPVLLAFYLEEVSKRLQKSLVHLSSDVVGL
LVRYDWPGNIRELVHTVEVLVSLADSNHITISDFPPHLTKFFASPYDLGVTERTPTPNVD
VSRMEYHRSNGVRDSIANYEKKMIEDALADAAGNKSLAAQKLGIHRSTLYEKLKRYNLN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccatccgaaattctacagacgtgctccaactgatcctagatacgatgtacgag
ggaattgtactggtagatgaacagggtcatattctggaaatgaaccaggcctaccttaag
ctattagacatggagcgggatgcggtcattggccggcacgtgacagatgtgattgaaaac
acgcggatgcacaaagttctggagacagggattccagaacgggggcatctccagcaactt
cagggtcatgacatgattgtgcatcggatcccaatttggcaagacggaaaaatgattggc
gcgttaggtgttctcatttttgaaagcatcggtgaactctatcgcattatcgagcggact
caagaaatcctgcgatccgataatgccggaccatcagacttgcgtcaggatgtcgaaacg
attccccagcggcgtgcttatacgattgacgagaccattggtcagagtcaatctattatg
ttactgaagcaaatggccaaaaaggcagccaagacacctgttacggtcctcatcacgggt
gaaagtggtaccggtaaagaggtcatggcacaagggattcactacgaaagtaacagagca
aacggccctttcgtcagcgtgaattgtgcagccattccggaaaacctgcttgaaaccgag
ttgtttggatacgatgacggcgcctttacaggtgcgaaaaaaggagggaagccgggacaa
attgagttggcgcacatggggacgttgtttttggacgaaataggggatatgcctgtgaac
atgcaggcgaaactacttagagttttggaagagagagaaattcagcgggttggtggcatc
accaagcggtatgtgaatacgagaattatttccgcgacgaaccgcgatttggagcaaatg
gtccagaaggggcaatttcgtgaagacctgtactaccgactcaacattatccgtcttcac
ttacctccattaagagagcgcagagaggatattcccgttctccttgcgttttacttagag
gaggtatcaaagcggttacaaaagtcacttgtccatttgtcgtcggacgtggtcgggctg
cttgtgagatacgactggccaggaaacattcgagaattggttcatacagtggaggtttta
gtgagtctagccgattcgaaccacatcacaatttctgactttccaccgcacttgaccaaa
tttttcgcatcaccatatgacttaggcgttacagagcgaacaccgactccaaacgtcgat
gtaagcagaatggaatatcatcgttcaaacggtgttcgagactcgatagcgaactatgaa
aaaaagatgattgaggatgccttggcggacgcagcgggaaataagtcgttggcggcgcaa
aaacttggtattcatcgttctacgctctatgagaagttgaagcgctacaatctcaactaa
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integrated database retrieval system
