Alicyclobacillus fastidiosus: NZD89_10345
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Entry
NZD89_10345 CDS
T08690
Name
(GenBank) DEAD/DEAH box helicase
Organism
afas
Alicyclobacillus fastidiosus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SWIM
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
WAH43745
LinkDB
All DBs
Position
complement(2086670..2089999)
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AA seq
1109 aa
AA seq
DB search
MSVQLTHGMIKSLCGQVSYASGKTYYRLRKVTFTSYHPELSLYEATVKTNHHTDQHCRVA
VQIQNNGHVIASCTCPTLDSYDNHCQHVAAVLLYLHDIEHLGISPVCSNHPEGLSPAGIE
PPATPSLPPADTHLPSANGLQLTKRFLGLFTNQRPPSRRMHPLIDTRTTVDVAFTYRPVA
SGDEKYVFGIEVQMGAQQFHTVRNIREFLDRMDCGEPSVISLDFTYQPALHRVRMEDDSV
LRQLIQIYRSEQLYRDSSNPPSSEPSAIYDNQILCVPPVLWDGVLAALAKAPSVRLKHGD
ASFEGVHLSDEPLPLQFEFDQTLAGSYQLSVQGLEQLIVMESYGMVVSEGRLFRVNPDEC
RCLALMKQMMDVSSERHIPIPPDQMEPFIQAVIPGLMKLGSVHIANAVSEKIVQTPLKAR
LYLDRVRDRLVAGLEFQYGDIVINPLEGHGQKQPTGRMLVRDGEQERRILEVMEQSRFSK
TEAGYFMDEEDLQYDFLYHVVPQLENWLTVYATTAVKERLHRGHASPTVAVDVSSRTDWL
ELRFDMDGIPEAEIRSLLKSLREKRKYYRLRSGALVPLESEEFQEIIRLMGEFGIRDGDI
QGAKTHVPLAHGLHLLGANRRGSAVKLGTSLRQLIEHLQNPNQLDFPVPQSLEQILRDYQ
TRGFQWMKTLAHYGFGGVLADDMGLGKTLQSIAFIVSALPEMRYQALPALIVCPASLVYN
WHNELKKFAPEIRVAVADGSKADRTTVLKGTSHIDVLITSYPLLRRDVEQYVDQSFHTLI
LDEAQAFKNHTTQTAKAVKAIRAAHRFALTGTPVENHLDDLWSIFDVVFPELLPGRRAFN
EMSRETVARRTRPFVLRRLKRDVLQELPEKIESLQLSQLLPDQKKLYVAYLAKLQQETVK
HLSRDGYQKNRIKILSGLTRLRQLCCHPALFVEGYTGKSAKFEQLVEILAACRRAGKRVL
VFSQFTEMLGLIRRELGVLGAPYFYLDGETKAYDRVDLCDRFNQGEGDLFLISLKAGGTG
LNLTGADTVILYDLWWNPAIEQQAADRAHRMGQKNVVQVIRLVSQGTVEEKMYELQQKKI
SLIDEVVNPGEEAIAPLTEQDIRQILRLD
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcagttgacccacggcatgatcaagtcattatgcggccaggtctcctacgca
agcggaaagacctactaccgattgcgaaaagtgacttttacaagctatcatccggaactg
tcgctctatgaagccacggtcaaaacgaaccatcacacagaccaacactgtcgcgttgcc
gtgcagattcaaaataatgggcacgtgatcgcgagctgtacctgccccacattggattcg
tacgacaaccactgccagcacgtcgcggcggttcttctctatcttcacgacattgagcac
ctcggcatatccccagtatgttctaaccatcccgagggcctttcgccagccggaatagaa
ccccccgccactccatccttgccgcccgcggacacgcatttaccatcggcgaacggtttg
caattgacaaagcgtttcctcgggctgttcaccaaccaaaggccgccatcaagacgtatg
cacccgcttatcgacacgaggacgacggtcgatgtcgcgttcacttatcggcctgtcgca
tccggggatgaaaagtacgtgttcggtattgaggtccagatgggagcgcaacaattccac
acggtacggaatattagagaatttctcgaccggatggactgcggggagccttcagttatc
tctttggacttcacgtaccaaccagctctgcaccgcgtgcgaatggaagatgactcggta
cttcggcagttaattcaaatctaccgcagcgaacagctgtaccgagattcatcaaatcct
ccttctagcgaaccaagcgctatctacgacaaccagatactgtgcgttccgcccgtcttg
tgggacggtgtccttgcggcactggccaaagcgccctccgtgaggcttaagcacggtgac
gcgtcgttcgagggggttcatctgtccgacgaaccgctaccccttcagtttgaatttgac
caaacacttgccggttcctatcagttgagcgtccaggggttagaacagttgattgtcatg
gaatcgtacgggatggtcgtctccgaaggaaggctgttcagagtgaaccccgatgagtgc
cggtgcctcgccctaatgaagcaaatgatggacgtttcgagcgaacgccacatcccgatt
ccgccggaccagatggaaccgtttatccaggcggtgatccctggactgatgaagttgggc
agcgtccacatcgcgaacgcagtttccgaaaaaattgtacaaacgccgttaaaggcccgg
ctgtatctcgaccgagttcgcgaccggctggtggctgggctcgagtttcaatacggcgac
atcgtcatcaatccgttagaaggacacggtcaaaaacagccgaccgggcgcatgctcgtg
cgcgatggcgaacaggagcggcgaattctcgaagtgatggaacagagtcgtttcagcaaa
acggaagccggctacttcatggatgaagaagacctgcaatacgattttctctatcacgtg
gtcccacaactggagaattggttgacggtatatgccaccacggccgtgaaagaacggctt
cacaggggacacgcatcgccaaccgtggcggtggacgtgagttcccgaaccgattggcta
gaattgcgatttgatatggacggaattcctgaagccgaaattcgcagtctcctgaaatcc
ctccgcgagaagcgcaagtactaccgattgcgaagtggtgcgctcgtccccttggagagc
gaagagtttcaggaaatcatccgactcatgggcgagttcgggattcgagatggggatatt
caaggagcgaaaacccacgttccactcgcgcacgggctgcatttactaggcgcaaatcgc
cgagggagcgccgtcaagttgggtacgtcgttgcgtcagttgatcgagcatctgcagaat
cccaaccagttggacttccccgtgccccaaagccttgagcagattctccgagactaccaa
acgcgtgggttccagtggatgaaaacactcgcgcactacggttttggtggcgttctagcc
gacgatatggggcttggcaagaccctgcaaagcattgcgtttatcgtctccgcgctgcct
gagatgagataccaggcgcttccagccctcatcgtgtgcccggcttcgcttgtgtacaac
tggcacaatgagctcaagaaatttgcacccgagattcgggtcgccgtcgcggacggaagc
aaagcggaccgaaccacggtgctcaagggcacatcccacattgacgtcctcatcacgtct
tacccgcttttgcgcagggatgtcgagcagtatgtcgatcaatcgttccatacgctcatc
ttggacgaggcgcaggcgttcaagaaccacacgacgcagacggcgaaagcggtcaaggcg
attcgggccgcacaccggtttgcgctcactgggactcctgtcgagaatcatctcgacgat
ttgtggtccatctttgacgtggtgttccccgagttgctcccaggtcgcagggcgttcaat
gagatgtcgagggaaaccgtcgcgaggcgcactcgcccatttgtgctgcgccggttgaaa
agagacgtgctgcaggagcttccagagaagatcgaatcgctgcaactcagccagttgctg
ccggatcaaaaaaagctatatgtcgcgtatttggcgaaactgcaacaggaaaccgtcaag
cacctcagtcgagatggatatcagaaaaaccggatcaaaattctgtcggggctgactcga
cttcgccagctctgctgccacccagccctgttcgtcgaaggatatacgggcaaatcagcg
aaattcgaacagttggtagaaatcctagcggcgtgcaggcgtgcgggcaaacgggttctc
gtcttttcacagttcaccgagatgctcggactcatccggcgcgagcttggcgttcttgga
gcgccgtacttttatttggacggggagaccaaagcttacgatcgcgtcgacctgtgcgac
cgattcaaccaaggagaaggggatttattcctcatctcgttaaaagctggaggaacaggc
ctcaacttgaccggcgccgataccgtcatcctctatgatctgtggtggaatcccgcaatt
gaacaacaggcggccgaccgggcacaccgaatgggtcagaagaacgtggtgcaagtcata
cgcctcgtcagccaaggcactgtggaggagaagatgtacgaactgcagcaaaaaaagatc
agtctgatcgacgaagtggtcaatccaggcgaggaagccatcgcacctttgacggaacaa
gacatccgacaaattctccggttagactga
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