Anoplopoma fimbria (sablefish): 129092753 Help Entry 129092753         CDS       T09102                                  Symbol cdh23 Name (RefSeq) LOW QUALITY PROTEIN: cadherin-23   KO K06813   cadherin 23 Organism afb  Anoplopoma fimbria (sablefish) Brite KEGG Orthology (KO) [BR:afb00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:afb03037]     129092753 (cdh23)    04515 Cell adhesion molecules [BR:afb04515]     129092753 (cdh23) Cilium and associated proteins [BR:afb03037]  Primary cilia and associated proteins   USH complex and associated proteins    129092753 (cdh23) Cell adhesion molecules [BR:afb04515]  Cadherins   Major cadherins    129092753 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Sde0182_C Motif Other DBs NCBI-GeneID:  129092753 NCBI-ProteinID:  XP_054456744 LinkDB All DBs Position 6:19651232..19684044 Genome browser AA seq 1978 aa AA seqDB search MAFLFYSLHLSLEVQKVSITIIDENDNSPEFDITSDTSVDILENTPMGKKVAVVLGRDKD AGLNGLVNFTLVAGNMEDVFKIKTVNHTYGEVFVNAALNRESVDRYLLKVRAIDNGSPPR HTDHSLTINILDINDNAPVIESLRGYNVSISENVGGGTSVLRVIATDKDIGPNAMLFYYI TAGNQDLTFRMDRVTGEMVTRPAPPDRERQQEYRLTVTVEDDGTPPLSTSTTIYVHIVDE NDNAPEFPEEEYVTVLSEGPDTVGATIATVTAIDPDEGLNGTLRYAIAQGNLIQTFNINS ITGRITAVKELDYEISNGHYALVVTATDQCPKPALRLTSSTTVLVNVLDVNDVTPTFPRA FEGPFEVTEGQPGPRVWTLKASDEDSGLNGKVEYSITGGDPQNEFMVSPVEGELRVRKDV ELDRETTPFYNITVTARDLGTPSRNSSVVVGVNVRDINDNDPVLLNLPYNTSVSEGATIH TSVARVQARDADSGRNALLTYNITAGNQDGAFYINDTTGVVQVNRPLDRERVAEYTLTIT VKDNPENPRIARRDSDLLVITVLDENDNRPIFTRTSYRAEITENSEAGSTVTVLNGPVQA EDKDIGPNAVVKYRLLGARVDLFTVDANSGVIRVRQGAKLDREAFQEPRVELFLVGEDIG GLNSSVPLTVTILDQNDNPPVFSPSSFSVRLPENSPSGVVVTQLSATDADSGSNGWLMYR LESGAQDRFVVDPLSGAVLVGNSTLDREERGSYRLVVMATDRGTPPMSGTATLTVILDDV NDSRPRFIEPVNMINVNESTPPGVVVATLTAVDPDLHPRLEYYIISVEAKDDGNKPVDGL QESFGIDLHTGAVFVRNPLNRELVATFEIIVSVHDNASEVIDKSGSVPNARLSINVLDVN DNAPRFRPFGVSNFTEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRGGYVRLE DPSTGKIVANQTVDFEQVQWLNFTIRAQDHGTPPRIAELPVYLRIVDVNDNNPVFLQPSY QEPVFEDVDLGTTIIRVKATDADSGLFAVIEYSLVDGEGRFGIKPTTGEIYIISPLDRET KDHYTLTAVARDNPGGSSNNRRENSIQVLVTVLDVNDYRPRFTERVFNTSVFENEPSGTS VITVKANDLDEGENGAVLYSLLGLHSDAFSLDPNTGLVRSRRLLQSSEHFNLTVVATDQG RPPLWSTADLIITVIDVNDNRPVFVRPANGTIIHISEEQPPGLPVYEVHATDSDEGVNGE VRYGFLQTGAGNRDWENFHIDAMSGVITTTVKLDRERQALHSLIIVARDMGQPVPYETTQ PLQVALLDIDDNEPVFLKPPRGSLPYQRLAVPEHXPPATVVGNVTRAVDADEGSNAIVYY FIAGGNSDGNFGLSLDGELKLLMDLDREEIPVYSIIIKASSNRSWTPPRGKRAARAKALD PASDPSLLEVRIELEDINDQKPRFTKAEYTAGVAANAKVGSDLIKVVAIDNDIGNNSLVQ YHIVTIRYFQSQSNGSEDVGSIFIIGLMDGIIRTYDLFTAYNPGYFQLEILACDFAGHST TTNVNIYILRDDQRVKIVFNEIPDLVRENQEDFVNLLSNITGAIVNLDDIQFHVDKKGRV SYAQTDMLIHVVNNQSNTILDVARVIQMIDENKEQLRNLFRKYTVVDVQPAVTDKLPDDI TTLQLVIIILAVLLCLAGILFVTMNWHYHRVHQRKLKAIVAGSTGNQGLMDILDMPNTNK YSFEGANPVWLDPFCRNLELAAQADHEDDLPENLSEITDLWNSPARTHGTFGREPQAKPE DDRYLRAAIQEYDNIAKLGQIMRDGPIKGSLLNVVLDDYLRLKKLFAARLVTVSTSQGDH SSVTELIQSDLDDDEEEHLGMGGGRGTLRFKHKLPVELKGPDGVHVVHGSTGTLLTSDLS SLPEDDQRALARSLEALNADGGLYSERNARTESAKSTPMHRHKDGDTLSESPLEITEL NT seq 5937 nt NT seq  +upstreamnt  +downstreamnt atggcattcctcttttattcattgcatctctcattggaagtgcagaaggtttcaatcacc attatagatgagaatgacaacagtccagagtttgacatcacatcagacacttcagtggac atcctagagaacacacccatggggaaaaaagtggcagtggtgctgggaagggacaaagat gctggattaaacggactggtcaatttcactctggtggcaggcaacatggaggatgtgttc aagatcaagacagtgaaccacacctacggggaggtttttgtcaatgctgctctgaacaga gagtcagtagaccgctatctactgaaggtgcgtgccattgacaatggctcacctcccaga cacacagaccactccctcaccatcaacatcctggacatcaatgacaacgcacctgttatt gaaagcctgagggggtacaacgtcagcattagtgagaatgtaggaggaggaacatctgtc ctccgtgtgatagcgaccgacaaagacatcggtcccaacgccatgctgttctactacatc actgctggaaaccaggacctgaccttccgcatggaccgcgtgacgggagagatggtgaca cggccggctcctcccgacagagagcgccagcaggagtatcgtctcactgtcactgtggaa gatgatggcacgccacctctgtcgacctcaaccaccatctatgttcacattgtggatgag aacgataacgccccagagtttcctgaggaggagtatgtcacagtgttgagcgagggaccg gacacagtcggtgccaccatcgccacggtaacagccatcgacccagatgagggtctgaat ggcaccttgcgatatgccatcgcccaaggaaacctgatccagacctttaatataaacagc ataacggggagaattacagccgtgaaggagctggactacgagatcagcaacggacactac gcactggtcgtcacagctacggaccagtgtccaaagcctgctcttcgcttgacatccagc acaacggtgctggtaaatgtcctagatgtgaacgatgtgacacccacttttcccagagcc tttgagggacccttcgaggtgactgagggccaaccaggacctcgggtctggactctcaaa gccagtgatgaagattctgggctcaacggaaaagtggagtacagcatcactggtggagat ccccagaatgagttcatggtttctccagtggagggcgagttgcgggtgaggaaggacgta gagctggacagagaaacgacacccttctataacatcactgtaacagcccgagacctgggc accccatctcgcaacagctcggtcgtggtgggggtcaatgtccgagacatcaacgacaac gacccggtcctcctgaacctgccttacaacaccagcgtcagtgaaggcgccaccattcac acctctgtggccagggtccaagcacgagatgcagacagcggacgaaatgcattgctaact tacaacatcaccgctggcaaccaggatggagccttctacatcaacgacacgacaggtgtg gtgcaggtgaacagaccactggacagagagcgagtggctgagtacacactcaccatcacc gtcaaagacaacccagagaacccccgcatcgctcgcagggattcagacctcttggtcatc accgttctggatgagaatgacaacaggccaattttcaccaggaccagctacagagctgag atcacagagaactctgaagcaggtagtactgtaacagtgttaaatgggccagttcaggct gaggataaagacattggacccaatgctgtggtaaagtatcgcctgctgggagccagggtg gacctctttactgtggatgccaattctggtgtgatacgtgtgcgtcagggggcgaagttg gaccgtgaggcgtttcaggagcctcgggtagagctgttcctggttggggaggacatagga ggtttaaacagcagtgtccctctcactgttaccatcctggaccagaatgacaaccctcct gtcttcagcccgtcaagtttcagcgttcgactccctgagaacagcccctctggtgtggtg gtgactcagctgtccgccactgacgctgattctggctctaatggctggctgatgtatcgg ctggagagcggtgctcaagaccgcttcgtggtcgacccgctctctggcgcggtcctggtg ggcaacagcaccctcgatagagaagagcgtggttcctaccgccttgtcgtcatggcgact gatcgtgggacgccccccatgtctggcacagccaccctgacagtaattctggatgacgtt aacgactcccgaccccgttttatagagccagtaaacatgatcaacgtcaatgagtccacc ccgccgggtgtagtggtggccacgctgaccgctgtggaccctgatctgcatccccggctg gagtattacatcatctcagtggaggcaaaggatgatgggaacaaaccagtggatgggctg caggagtcctttggcattgacctacacactggtgcagtgtttgtacgcaacccactgaac agagagctggtagctacatttgagatcattgtgtctgtccatgacaatgccagtgaagtt attgacaagtcaggaagtgttcccaacgcgagactatctataaacgtgttggatgtaaat gacaatgccccacgtttccggcccttcggagtgtccaatttcacagagaagattttagaa ggagcccagccaggcacaacactgctatcagtatcagctgtagaccctgataaaggtccc aacggccaggtcatctaccagttgctccacctgccccgagggggatacgttagactggag gacccttccactggtaagattgtagccaaccagacggtggatttcgagcaggtgcagtgg ctgaattttaccattcgggcgcaggaccatggcactcctcccaggatagccgagctgcct gtttatctacgcatagtggacgtgaacgataacaaccccgtcttcctacaaccctcatat caggagcctgtgttcgaggatgtcgacctgggcaccaccataattcgtgtcaaggctaca gatgccgactctggcctctttgccgtcatcgagtacagcctggtagacggggagggcagg tttggcatcaaaccaaccactggagagatctacatcatttctcctctggacagagagaca aaggatcactacactttaaccgctgttgcccgtgacaaccctggcggcagctccaacaac agacgagagaactcaattcaggtcctggtgaccgtcctcgatgtcaacgattatcgtcca cgcttcacggagcgagtgttcaacaccagcgtgtttgagaatgagcccagtggaacgtct gtgatcacagtgaaggctaacgacctggatgaaggagaaaatggagcggtactctacagc ctgctgggactccattcagatgcgttctccctggatccaaacacagggctggtgcgttct cgccgcctgcttcagtcctctgaacatttcaacctgaccgtggtggctacagaccagggg cgtcctcccctctggagcactgcagacctgatcattacggtcatagatgtcaatgacaac agaccggtgtttgtcaggcccgccaacggaaccatcattcatatctcagaggagcagccc ccaggcctgccggtgtatgaggtgcatgcgacggactctgacgagggggttaatggggag gtccgctatggcttcctgcagactggagcgggtaacagagactgggaaaacttccacatc gacgccatgtcgggagtcatcacaactactgtgaaactggaccgagaaagacaggccctc cacagccttatcattgtggcccgcgacatgggccagccagtgccttacgagaccacacag cctctgcaggtggcgctgttggacattgacgacaatgaacccgtcttccttaaaccaccg cgtggcagcttgccttaccagaggctggcagtgcctgagcacntccctccagctactgtg gtggggaacgtcaccagagcggtggacgcagacgagggctccaatgccatcgtttactac ttcattgcaggaggaaacagtgatggaaactttggcttgagtctagatggagagctgaag ttgcttatggatctggaccgggaggagatcccggtctactcaatcattatcaaggcttcc agcaacaggagctggactcctcccaggggtaagagggcagcacgggccaaagccctggac cctgccagtgaccccagcctgctggaagtccgcattgaactggaagacatcaatgaccag aaaccacgcttcactaaggcggagtacactgcaggagtcgcagcaaatgccaaagtgggc tcggatctgatcaaggtcgtggctatagataatgacatcggcaacaacagcttggttcaa taccatattgttacaatccgctatttccagtcacagagcaacggcagtgaggacgttggc agcatcttcatcatcggtttgatggatggcatcatccgcacatatgacctcttcaccgcc tacaatccaggctacttccagctggagattttggcgtgcgatttcgctggacacagtacc accaccaacgtgaacatctacattctccgagatgatcagagggtcaagatagtcttcaac gagatccctgatttggtccgtgaaaaccaggaagattttgtcaacctgctgtccaacatt actggagccattgtcaacttagatgatatacagttccatgtggacaagaagggcagggtc agttatgctcagacagacatgctcatccacgtcgttaacaatcagagcaacactatccta gatgttgcaagggtaattcagatgatagatgagaacaaggagcagctgaggaacctgttc aggaaatacaccgttgtggacgtgcagcctgctgtcactgacaaactgcctgatgacatc accacacttcagctggtcatcattatcctggctgtgctgctgtgcttagcaggaattttg tttgtcacaatgaactggcattatcacagagtacaccagaggaagctgaaagcaatcgtt gcaggatcaacagggaaccagggtctaatggatatcctggacatgcccaacactaacaag tactcttttgagggggctaatccggtgtggctggacccattctgtcgcaacctggagctg gctgctcaggctgaccacgaggacgacctgcctgagaacctgagtgagataactgacctg tggaacagccctgcacgcactcatggcacatttggtcgagagcctcaagcgaagcctgag gatgatcgttacttgagggcagccattcaggagtacgacaacattgctaaactgggccag atcatgagggacgggcccatcaagggttccctgctcaatgtggtcctggacgactacctg aggctgaaaaagctctttgcagcacgactcgtcacagtgtccaccagtcagggagatcac tcgtcagtcactgagctgatccagagtgatctggacgatgatgaggaagagcatctgggc atgggcggaggtcgcggcacactgcgcttcaagcacaagcttcctgtggagttgaagggt cccgatggtgtgcacgtggtccacggcagcacaggtacccttctgacctctgacctcagc agcctgccagaggacgaccagcgggccctggcacgttctctggaggcactgaacgcggac ggggggctctattctgagcgcaacgcccgcacagagtcggccaagtccaccccgatgcac cgtcacaaggacggggacaccctgtcggagagtcccctggagatcacagagttatga

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