Anoplopoma fimbria (sablefish): 129098074
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Entry
129098074 CDS
T09102
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129098074 (recql5)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129098074 (recql5)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
129098074 (recql5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RecQ5
TFIIS_M
ResIII
EPF
KIX_2
Motif
Other DBs
NCBI-GeneID:
129098074
NCBI-ProteinID:
XP_054463002
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All DBs
Position
11:2777360..2789595
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AA seq
1007 aa
AA seq
DB search
MTTTLKQALKTHFGFDNFRSKIQEEVVEVIVKGDRDVFVCMPTGAGKSLCYQLPAVLAEG
ITLVISPLIALIQDQVDHLRSLNIAACSINSKLPAGERRLILADLGSSSPKLKLLYITPE
MVASPSFQPCLTGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGRLPGVPCLAL
TATAPKNVQEDVVQSLRMRSPLSFVTPVFRSNLHYDVIFRELLPNPYLHLYAFIQKSLAL
DSGSKGQGCGIVYCRTREGCETVAHQLTKLGVLSKPYHAGLSAGDRTDSQNEWMQGKVLV
IVATISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDKEQMN
FLIRKEVARKQEKRGSAKEADKASITDFDAMVSFCAQEACRHATISKFFGNTPPNCAGAC
DFCQNPKAVRAQLERAAVLSTKTGAQSQEATGPFGFQRGLYEGGRKGYGFERFDEGDASS
DEEDGSKRKKVFSDLFKKQMKMRKATDNRRGDFVTPDADCPLREASSQRIPRLTVKAREH
CLCLLQEALYGHQGADDAFSDTLSLAADIEHEVFKSSKSSNLYKAAVLKKVSEMKKTAPG
EKREGVKADSSSENESKLKEEPPSSSSTSFSEELQGFTSASEIYSMKRKRVGAGLRGSSN
PFQTAKDLLKTSTSDSLSNKRTESGGFYDDSSGGSEGTKTDVSTAVTSSVRDRAKAVAAQ
SLSSPTKAGRAMSKKQQKLAEAAKSSRNISQFFAKKETTEKSHEEAETLPGLDATMEVDQ
ESNEEHSPVPVEDEEISPVETQDLIQEESKRDVIVIHDDDDDDGGDEEEETHQTETLELE
RLKDTSEENMESVTEQNKPEEEAKPAPTEGLTDDMKIEIRGSSPPAKRSRPAERRVTFNP
NVQERALLPVNEPPKPVTLKEAADIVVRYLDPFYTQGKFATKELFKSFARYLSHLLAEGR
SLGKGQVKAEAKALIKKFFSGVKRCESEADWKHLKRPHSCKTTENKE
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactttaaaacaagctctgaaaacccactttgggttcgacaacttccggtcc
aaaatacaggaggaagttgtggaagtgatagttaaaggtgacagggatgtgtttgtgtgc
atgcccactggggcagggaagtccctctgctaccagctgcctgctgtcctggctgagggt
attactctggttatatccccgctgatcgctctcattcaggaccaagtggaccacctgagg
agcctgaacatcgccgcctgctccatcaactccaaactcccagccggcgagcgtcggctc
atcctggctgatttagggagcagcagccccaagctgaagctgctctatataacacctgag
atggtggcctctccctcgttccagccctgcctgaccggcctgtgctcccgcggcctgctg
tcctacctggctgtggacgaggctcactgcgtctcccagtggggacacgacttcaggccg
gactacctcaaactgggagagctgcgaggtcggttgccgggggttccctgtttggccctg
acggcgacggcgcccaagaatgtacaagaggacgtagttcagtccctgaggatgcgctcg
ccgctctcttttgttacacctgtgttccgcagtaacttgcactatgatgtgatcttcagg
gagctgctgccaaacccttacctccacctctacgccttcattcagaagtccctggctctg
gacagcggctctaaaggacagggttgtgggattgtgtactgtcggaccagggagggctgt
gaaacggtggctcaccagctgaccaagctcggagtcttgtccaaaccgtatcatgcaggt
ctgagtgcaggagatcgcacagactcccagaacgagtggatgcaggggaaggtgctggtg
attgtagccaccatcagctttggtatgggagtcgacaaggccaatgtcaggtttgtggct
cactggaacctcgccaagtctctggccagttactaccaagagtccgggcgagctgggaga
gacgggctgccctcctcctgtcgcacgtactactccccaaaagataaggagcaaatgaac
ttcctcatccgcaaagaagtcgcccgcaaacaggaaaaacgaggctctgcaaaggaggcg
gacaaagcgtccatcacagactttgatgccatggtgtccttctgcgctcaagaagcttgt
cgccatgccaccatctccaagttctttgggaacacaccgccaaactgtgcaggcgcctgc
gacttctgtcagaaccccaaagctgttcgcgcccagctggagcgggcggccgtcctcagc
accaagaccggggctcagagccaagaggccaccgggccgttcggcttccaacggggcctc
tatgaaggagggaggaagggctacggctttgagaggtttgacgaaggtgacgccagtagc
gatgaagaggatggctcaaagaggaagaaggtgttttcagacctcttcaagaagcagatg
aaaatgcggaaggcaactgacaatcggaggggagactttgttactccggacgctgactgt
ccgctcagagaggccagcagccagaggatccccagactcactgtgaaggccagagagcac
tgcctgtgccttctgcaggaggcgctatatggccaccagggggcagacgatgcattcagt
gacaccctgtccttagcggccgatatcgaacacgaggtcttcaagagcagcaagtcctcc
aacttgtacaaagccgctgttctgaagaaggtttctgagatgaagaaaacagcacctgga
gaaaagagagaaggtgtcaaagctgacagcagcagtgaaaatgagtcaaaactcaaagag
gaaccaccctcgtcttcttccacctccttctctgaggagctgcaggggttcacatctgca
tctgagatctactcaatgaagcgtaagagagtaggagcaggcctgagaggatcatccaac
cccttccagaccgctaaagatctgctgaagacctccacgtcggactctttgtccaacaag
aggacggagagcggcgggttttacgacgacagctcaggaggctctgaggggacgaagaca
gatgtttctacagctgtaacctcgtcggtcagagacagagcgaaggccgtcgccgcccaa
tccctgagcagcccgacgaaggccggcagagccatgagcaagaagcagcagaagctagcg
gaagcagcaaagagctcccgaaacatttcccagttttttgcgaagaaggaaacgacagag
aaaagccacgaggaggcggagacgctgccgggacttgatgcaacgatggaggtcgatcaa
gaaagcaacgaggaacactcgcctgtccctgtggaagacgaagagatcagtcctgtggag
actcaggacctgatccaagaggaaagtaaaagagacgtaatagttatacatgatgatgat
gatgatgatggtggcgatgaagaggaggagacacatcaaacagagacgttggagctggag
cggctaaaagacacatcagaagagaatatggagtccgttacagaacaaaacaaaccagaa
gaagaagctaaaccagctccaacagaaggattgacagatgacatgaaaatagagatcaga
gggtcgtctcctccggcgaagcgcagccgccccgcagaaagacgagtaaccttcaacccc
aacgttcaggagagagccctgctgcccgtcaacgagccccccaagcctgtgacgctgaag
gaagcagccgatatcgtggtgcgctacctggaccccttctacactcaggggaagttcgcc
accaaggagttgtttaaatccttcgcccgctatttatctcaccttctggcggaggggagg
agtctggggaaaggccaagtcaaagcagaagccaaagctctcatcaagaagttcttcagc
ggcgtgaagcgctgcgagagcgaggccgactggaagcacctgaagaggccgcacagctgt
aaaaccacagagaacaaggaatga
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