Anoplopoma fimbria (sablefish): 129113201
Help
Entry
129113201 CDS
T09102
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129113201 (tyw1)
Enzymes [BR:
afb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
129113201 (tyw1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
129113201 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
129113201
NCBI-ProteinID:
XP_054481415
LinkDB
All DBs
Position
1:27686888..27744903
Genome browser
AA seq
771 aa
AA seq
DB search
MLLGQRQVAHSISCRGLCILIAMLTFFVVITLWISRVSASDTKVSQNAHSPSESYLQSIW
HNRLYLYSAAALVFGVWFSLKVALKKKKFSKDSEAGKSNEGSDRDTVFHVSGVKIFYGSQ
TGTAKGFAEELSEEVKMLGIPAEVIDIKDYDPDDQLADECVNKSVCVFLMATYTDGEPTE
NAEWFCKWLEEASTDFRYGKTYLKGLRYAVFGLGNSVYVGHYNTVGTNMDKWLWMLSGVR
IMTRGEGDCNVVKSRNGSIQADFLAWKVKFLIRLQALVKGEKKSCSGNCKTGGSCENKRK
DGQEEEEEEKEKAALQNNSSEEDLVESSSDGEESGLQDEKTSGSVVDMEDLGNIMSSAKR
AKSKEEGRGDGQMVKLSKVNGVKKIEDEGERREMITPVLRVALTKQGYKLIGSHSGVKLC
RWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDP
AEKILQEAMEKHQSMIRQFRGVPGVKPERYEEGLAVKHCALSLVGEPIMYPEINTFIRLL
HTHRISSFLVTNAQFPQEIRSLVPVTQLYVSVDASTKDSLKKIDRPLFKDFWPRFLDSLR
ALGEKRQRTVYRLTLVKAWNVEEMQSYSELIALGQPDFIEVKGVTYCGESSASSLTMANV
PWHQEVVAFVQQLADMLPQYEIACEHEHSNCLLIAHTKFKVDGEWWTWIDYERFQELVQV
QEESGGQRGFSALDYMAKTPGWALFGANEQGFDPTDTRFQRRNKTKDISGC
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgctcctcggccagaggcaggttgcacacagcatcagctgcagaggactgtgtatctta
atagcgatgctgactttcttcgtggtgattacgctttggataagtcgtgtgtctgcctcg
gataccaaagtctcacagaatgcccacagtcccagtgagagctatctccagtcgatatgg
cacaacaggctgtacttgtattcagctgcagcactcgtctttggggtctggttctcacta
aaggtggctctgaagaagaaaaagttctccaaagactccgaagctggaaagagcaatgag
ggctctgacagagacactgtgtttcacgtgtctggagttaaaatcttctatggctcacaa
actggaaccgcaaagggatttgcagaagagctgtcagaggaggtgaagatgttgggtata
ccagcagaggtgattgacatcaaagactacgatccagacgatcagcttgccgatgagtgc
gtcaacaagtcagtctgcgtgtttctcatggccacctacactgacggtgagcccacagag
aacgcagagtggttctgcaagtggttggaggaggcgtccaccgacttcagatacgggaag
acctacctcaaaggcctccggtatgccgtgtttggtctcggcaactctgtctatgtcggc
cactataatacggtgggtaccaacatggacaagtggctctggatgcttagcggcgtgcga
atcatgaccaggggagagggcgactgtaatgtggtgaagagccgtaatggcagcatccag
gcggacttcctggcctggaaggtcaagttcctgatccgcctacaggccctggtcaagggg
gagaagaagagctgcagcgggaactgtaagaccggaggctcctgtgagaacaagaggaaa
gatggacaggaggaagaggaagaggagaaggagaaggcagctcttcagaacaacagctct
gaggaggatctggttgagtccagcagcgacggggaggagtctggtctgcaggatgagaaa
acatccggttcagtggtcgacatggaggatctgggcaacatcatgagcagtgccaagaga
gcaaagagcaaagaggagggtcgaggagacggccagatggtgaagctgtccaaggtgaac
ggagtgaagaagattgaagacgagggggaaagaagagagatgatcacccctgtcctgaga
gtggcactgacaaaacaaggttacaaactcattggaagtcactctggagtgaagctttgt
cgatggaccaagtccatgttgcgagggagaggaggctgttacaagcacacgttctatggc
atcgagtcccaccgctgcatggagaccacgcccagcctcgcctgtgccaacaagtgtgtc
ttctgctggagacatcacaccaaccctgtggggacagaatggcgctggaaaatggacccc
gctgagaagatcttgcaggaggccatggagaagcaccagagcatgatccgacagttcaga
ggtgtccccggagtgaaacccgagcgctacgaggagggcctggccgtcaagcactgcgcc
ctctccctggtgggtgagccaatcatgtaccccgaaatcaacaccttcatccgcctcctc
cacacccaccgcatctccagcttcctggtcaccaacgcacagttccctcaggaaatcagg
agcctggttccggtcacccagctgtatgtcagcgtggacgccagcaccaaagacagtctg
aagaagatcgaccgaccgcttttcaaggacttctggccccgcttcctggacagcctcagg
gccctgggagagaagagacagaggacggtgtacagactgacgctggtgaaggcctggaat
gtggaagagatgcagtcctattcggagctcattgctttgggccagccggacttcatcgag
gtcaagggagtgacgtactgcggggaaagctccgccagcagtctgaccatggcgaacgtc
ccctggcaccaggaagtggtcgccttcgtccagcagctggctgacatgctgcctcaatac
gagatcgcctgcgaacacgagcactccaactgtttgctcatcgcgcacacaaagttcaag
gtggatggcgagtggtggacgtggatcgactacgagcgcttccaggagctggtccaggtt
caggaggagagcgggggacagcggggcttctcggccctggactacatggccaagactccc
ggctgggctctgttcggagccaacgagcaaggcttcgatcccaccgacacgcgcttccaa
cggcgcaacaaaaccaaagacatttcaggatgctga
DBGET
integrated database retrieval system
