Alysiella filiformis: H3L97_11570
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Entry
H3L97_11570 CDS
T06725
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
aff
Alysiella filiformis
Pathway
aff03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H3L97_11570 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aff03400
]
H3L97_11570 (uvrA)
DNA repair and recombination proteins [BR:
aff03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3L97_11570 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3L97_11570 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
AAA_23
nSTAND1
RsgA_GTPase
AAA_22
AAA_25
nSTAND3
cobW
T2SSE
Viral_helicase1
NACHT
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QMT31306
LinkDB
All DBs
Position
complement(2385885..2388731)
Genome browser
AA seq
948 aa
AA seq
DB search
MSKYTPIQNNDFIRIRGARTHNLKNIDLDIPRHQLVVITGLSGSGKSSLAFDTLYAEGQR
RYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLL
YARIGTPHCPEHGLPLASQTVSQMVDFVLQLPEDTRMMILAPAVRGRKGEFVDLFADLQA
QGFARVRVDGEVYTLDEVPKLAKTHKHDIDVVIDRIKVKPDLQQRLAESFETALRHGGDR
AIALEMDTNQEHWFSAQFACPMCSYSLPELEPRLFSFNNPVGACPSCDGLGSNDFFDPNR
VVAHPELSLAAGAIEGWDKRNQFYFQMIQSLAHHYGFDVDEQWCRLPENVQKIILHGSGK
EVINFKYLSEKGGTFERPHAFEGILPNLERRYRETDSETIRDKLREYQSHRACPSCGGAR
LRKEARYVLVGDTALHDLSALPLNQTLEFFENLKLDGNKAQIADKILKEITERLGFLINV
GLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLMTLKR
LRDLGNSVIVVEHDEDAIRHADFVVDMGVGAGEHGGRVLIADTPDKVAQCEHSVTGQYLS
GRKQIRLPEKRTPVNPDKMLVLTGARGNNLKNVTLELPLGLITCVTGVSGSGKSTLINDT
LAKIAARELNRAHEEPAPYDEIHGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIREL
FAGVPLARERGYSVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRE
TLEVRYKGKNISEVLDLTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGE
AQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIQRLKGKGNSIVIIEHNLDV
IKTADWIVDLGLEGGAGGGTILVSGSPEQVVKCKESHTGKYLKQVLEV
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatacacccccattcaaaacaacgacttcattcgcattcgcggtgcgcgcacc
cacaatctcaaaaacattgatttggacattccccgtcatcaactggttgtgattacaggg
ctttcgggttcgggcaaatccagcttggcgtttgacacgctctatgccgaagggcaacgc
cgctatgtggaaagcctgtcggcttacgcgcgtcaatttttgcagatgatggacaaaccc
gatgtggatttgattgaaggtttgtcgcccgccatttccattgaacaaaaatccaccagc
cacaatccgcgttccaccgttggcacggttacggaaatccatgattatttgcgccttttg
tatgcgcgtatcggcacgccccattgccccgaacacggcttgccgctcgccagccaaacc
gtttcacaaatggttgattttgttttgcaattacccgaagacacgcgcatgatgatactc
gccccagccgtgcgcggacgcaaaggcgaatttgtggatttgtttgccgatttgcaagcg
caaggtttcgcgcgtgtgcgcgttgatggcgaagtgtacacgctggacgaagtgccgaaa
ttggcgaaaacccacaaacacgatattgatgtcgtgattgaccgcattaaagtcaaaccc
gatttgcaacaacgacttgccgaaagttttgaaaccgccttgcgacacggcggcgaccgc
gccatcgccctagaaatggataccaatcaagaacattggttttccgcacaatttgcctgc
cccatgtgttcgtacagcctgcctgaattggaaccgcgcttgttttcgttcaacaatcca
gtgggcgcgtgtccgagttgcgatggcttgggcagcaacgatttttttgaccccaaccgc
gtggttgcccaccccgaattgtcgctggcggctggcgcgattgagggctgggacaaacgc
aatcaattttattttcaaatgatacaatcacttgcccaccattatggttttgacgtggac
gaacaatggtgcaggctgcctgaaaacgtccaaaaaatcattttacacggctctggcaaa
gaagtgattaacttcaagtatttatccgaaaaaggcggcacatttgaacgcccccacgcc
tttgaaggcattttgcccaatttggaacgccgctaccgcgaaaccgactccgaaaccata
cgcgacaaattgcgcgaataccaaagccaccgcgcctgtccaagctgtggcggtgcgcgt
ttgcgaaaagaggcacgatacgttttggtgggcgacaccgccttgcacgatttgtccgcc
ttgcccttaaatcaaacacttgaattttttgaaaatttgaaactggacggcaacaaagcc
caaattgccgacaaaatccttaaagaaatcaccgaacgcttgggctttttgattaacgtg
ggcttggattatttgaatttaagccgttcagccgaaacgctttcaggtggcgaggcgcaa
cgcatacgcttggcaagccaaatcggtagcggcttaacaggcgtgatgtatgtgttggac
gaaccttcaatcggcttgcaccagcgcgacaacgaccgattgttgatgaccttgaaacgc
ttgcgcgatttgggcaacagcgtgattgtggtggaacacgatgaagacgcaatccgccat
gccgattttgtcgtggacatgggcgtgggcgcaggcgaacatggcggtcgcgtactcatt
gccgacacgcccgataaagtcgcccaatgcgaacattcggttacaggacaatatttgagc
ggcagaaaacaaatcaggctgcctgaaaaacgcacccccgttaatcccgacaaaatgctg
gttttaacaggggcgcgtggcaacaatctcaaaaacgttaccctagaattgcctttgggt
ttaatcacttgcgtaacaggcgtttcaggcagcggcaaatccacgctgattaacgacacc
cttgccaaaatagccgcacgcgaactcaaccgcgctcacgaagaacccgccccctacgat
gaaattcatggcttggaacatttggacaaagtcatcaacgtagaccaatcgcccattgga
cgcacaccgcgttccaatccagccacttacacaggcttgttcacgcccatacgcgaattg
tttgcaggcgtgccattggcgcgagaacgcggttacagcgtgggcagattttcattcaat
gtcaaaggcggacgttgcgaagcctgtcaaggcgatggcgtgattaaagtggaaatgcac
tttttgccagacgtgtatgtgccatgcgaagtgtgccacggcaaacgctacaaccgcgaa
acgctggaagtgcgctacaaaggcaaaaacatcagcgaagtcttggacttaaccgtagaa
gaggcgcgtgaattttttgatgccgtgccgaccgtgtcgcgcaaattgcaaacgctgatg
gacgtgggtttgggctacattcgtttggggcaatccgccacgaccttatcgggtggcgag
gcacagcgcgtgaaattggcattggaattgtccaaacgcgacacagggcgcactttgtat
attttggacgaaccgaccacaggtttgcattttgccgacatcgccttattgctggaagtg
atacagcgattgaaaggcaaaggcaattccattgtgattattgagcataatttagatgtg
attaaaacggcggattggattgtggatttggggctggaaggtggtgcaggtggcgggacg
attttggtttcaggcagccctgaacaggtggtaaaatgcaaggaaagtcatactggtaag
tatttaaaacaagttttggaggtttaa
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