Acidithiobacillus ferridurans: AFERRID_02180
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Entry
AFERRID_02180 CDS
T05847
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
afj
Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afj03016
]
AFERRID_02180
Enzymes [BR:
afj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AFERRID_02180
Transfer RNA biogenesis [BR:
afj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AFERRID_02180
Prokaryotic type
AFERRID_02180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBF64000
UniProt:
A0A2Z6IEJ6
LinkDB
All DBs
Position
complement(227567..228373)
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AA seq
268 aa
AA seq
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MAEPRGTRWALGLEYDGNGFCGWQRQLDQDSVQGVVEAALSQVAQCPISVVVAGRTDTGV
HALCQVVHFDSPVVRRPDAWVRGANTALPAGVALRWARVVPDSFHARFSATARRYRYVIL
NRREKSALWRNHTAWIYSPLDVEAMQAAAQTLLGTHDFSAFRASACQAKSPVRNLCQLRV
VRRGDLIAVDAEANGFLHHMVRNLVGVLIAIGKADRPVDWAAEVLASRDRCRAGVTAPPG
GLYFVAPRYPAEFGLPVDAVDAGFLTGD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttggcagagccgagaggcacccgctgggcactgggcctcgaatacgatggcaacgggttc
tgtggctggcaacgccagttggatcaggacagtgtacaaggtgttgttgaggctgcgttg
agccaggtggcccagtgcccgatctctgtcgtcgtcgccgggcgaaccgatacgggggtg
catgccctatgtcaggtggtgcatttcgacagcccggtcgtgcggcgtcccgacgcctgg
gtgcgtggcgccaataccgcgttacccgcgggggtggcgctgcgttgggccagggtcgtc
ccggatagcttccacgcccgtttctccgctacggcccggcgttatcgttacgtgatcctc
aatcgtcgcgagaaatccgccctatggcggaatcacaccgcctggatatacagccccctg
gatgtggaggccatgcaggcagcggcgcaaactctgctgggcacccatgatttttccgct
tttcgcgcctccgcctgccaggccaaaagtcctgtacggaatttgtgccagcttcgggtc
gtccggcggggcgatctgattgccgtcgatgccgaggccaacggtttcctgcatcacatg
gtgcgcaatcttgtgggtgtgctgattgccatcggcaaggctgaccggcccgtggattgg
gcggcggaggtgctggccagtcgcgatcgctgtcgggccggcgttacggccccgccgggt
ggcctttatttcgtggcgccgcgttatcctgcggagtttgggctgccggtggatgcggtg
gacgccggtttcctgacgggtgattga
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