Acidithiobacillus ferridurans: AFERRID_22300
Help
Entry
AFERRID_22300 CDS
T05847
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFERRID_22300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afj03400
]
AFERRID_22300
DNA repair and recombination proteins [BR:
afj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AFERRID_22300
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AFERRID_22300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
BBF66012
UniProt:
A0A2Z6IKH2
LinkDB
All DBs
Position
2159969..2160736
Genome browser
AA seq
255 aa
AA seq
DB search
MTTEPGDRAWVLHHYPYGDTSLIVELFTRTQGRLGVLAKGARRARSALARIEAGRPLWVR
WLGRGELPVLAQAEELGPFLPLNPLQNLSLFYVNELLLRLTQRGDPFPDLFQVYEETIDA
LRSEPGEGWYLRRFERRLLENLGWAPDLARCAECGRSPDAASSEHWLYQAARGVFCPAHA
PDAAVTIEAAALVWLRGAMQTRHMPVWNSSLRRCLEQELRIHLGGRPLESRRLLTAYLRR
TPPAMTIQKREEHSE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaacccggtgatcgcgcctgggtgctgcatcactacccttacggagatacc
agcctgatagtggaattgtttacccggacacaaggccggctgggggtgctggccaaaggt
gcccgacgcgcgcgttctgcgctggcgcggatcgaggcgggacgccccctgtgggtgcgc
tggctgggacggggggaattaccggtactggcgcaggcggaagaactgggtccgtttctg
ccactcaatcccctacagaatctcagccttttttatgtcaacgagctgctgttgcggctg
acgcagcgtggagatcccttccccgatctctttcaagtctatgaagaaaccatcgacgcg
ttgcgcagtgaaccgggagaaggctggtatctgcggcgtttcgaacggcgcctgctggaa
aatctgggttgggcacctgatctagcgcgttgcgcggagtgtggccggtctcccgatgcg
gcatcttcagaacactggttataccaggccgcacgcggtgtattctgtccggcccatgcg
cccgatgctgcggtgaccatcgaggcggcggccctggtctggttacggggggcgatgcag
acacgccatatgccagtctggaattcctccctacggcgttgtctggaacaggagttgcgg
atccatctgggcggacgcccactggagagtcgccgcctccttacggcatacttgcgcaga
acaccgcctgcgatgacgatacagaaaagggaggagcacagcgaatga
DBGET
integrated database retrieval system
