Acidithiobacillus ferrooxidans ATCC 23270: AFE_0232
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Entry
AFE_0232 CDS
T00810
Name
(GenBank) O-antigen polymerase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr00540
Lipopolysaccharide biosynthesis
afr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AFE_0232
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
afr01005
]
AFE_0232
Enzymes [BR:
afr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
AFE_0232
Lipopolysaccharide biosynthesis proteins [BR:
afr01005
]
Core region
AFE_0232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
VitK2_biosynth
Motif
Other DBs
NCBI-ProteinID:
ACK80436
UniProt:
B7J3X6
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All DBs
Position
209110..210363
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AA seq
417 aa
AA seq
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MNINRADATLMKALLQKTMFLFFCLPIFFFPLSTAAAGISGGIFVLLYIMSGYWKNLGQI
PTRPWFIPLTLLILWTLLGTIWSRANPHDTWIAISRLGYFFFAYAGTTLPWNRSRFRMIP
GLFLAGLILNWIVGLCQWLGIWKWSPLIPRLGPVGYANHIFLSMTLTMALLWIAYDMRDR
VLLPRWANAILAVAFLLQLGMGAGRTGQLLFVILMPLAVWVLFRGQWRYWALGGIALTII
GMGMSPIVQHRVQEGLQNLQVVSKGDYDTSWGLRVLMAQGALYMGFQHPILGVGTGNYAN
EMAQLQKNHILPELPSPLIMSQPQNSYLLELAMLGIPGLLLLVWFLWAVTAPAWRLKAVP
EGWFVLIYMAVFIAGSFSDTLIWGYANVFSLAILTALPIPLAQDGLHGATTTDNRFA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaatataaaccgcgctgacgctacgcttatgaaagcacttttacaaaaaaccatgttc
ctgtttttttgtctgccgatttttttctttccgttaagtaccgcggcagcgggtattagt
ggcggtatcttcgtactgctatatatcatgagcgggtactggaaaaacttggggcagata
ccgacgcgcccatggttcataccgctgaccctgttgatattatggacgttgctaggcacc
atttggagcagagcgaaccctcacgatacctggatagccataagtcgactcggatatttc
ttttttgcgtacgcaggaacaacactgccttggaacagaagcaggttccggatgattccg
ggtttatttctggcgggattgatattgaactggatagtcggcctatgtcagtggcttgga
atatggaaatggagtccgttgattccgaggcttggccctgtcggttatgccaatcatatt
tttctcagcatgacgctgaccatggcattgctatggatagcctacgatatgcgggatagg
gttttgttaccgagatgggcaaacgcaattctcgcggtagccttcctgctgcaattgggc
atgggtgccggacgtactggtcagttgcttttcgtcatcctcatgccgcttgcggtatgg
gtgttattcagggggcagtggcgttattgggcgttgggaggtattgcgctgacaataatt
gggatgggaatgtctcccattgttcaacatcgagtgcaagaaggattgcaaaatttacaa
gttgtcagcaagggtgattacgataccagttggggactgcgtgttttgatggcccagggc
gcactgtacatgggtttccagcatcctatcctgggggttggtacaggcaattacgcaaac
gagatggcacaattacagaaaaatcatattctacctgagctgccatctccgttgatcatg
agccagcctcaaaacagttatctccttgaactggccatgctaggcattcccggtctgttg
ctgctagtgtggttcttgtgggctgtaacggcaccagcatggcgactgaaggcggttccc
gaaggctggtttgttttaatttatatggcggtatttatagctggtagtttttctgacaca
ttgatttgggggtatgccaatgtgttctcgctggcgatactgaccgccttgccaatcccc
cttgcccaggatggcttacatggcgcgactaccactgacaatcgcttcgcgtag
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