Acidithiobacillus ferrooxidans ATCC 23270: AFE_1217
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Entry
AFE_1217 CDS
T00810
Name
(GenBank) uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Pathway
afr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AFE_1217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afr03400
]
AFE_1217
Enzymes [BR:
afr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AFE_1217
DNA repair and recombination proteins [BR:
afr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AFE_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACK78754
UniProt:
B7J8Q0
LinkDB
All DBs
Position
complement(1072193..1072804)
Genome browser
AA seq
203 aa
AA seq
DB search
MDNCQRCPSLCASRTQIVFPDLPEFGRYCRVLVIGEAPGADEDAQGKGFVGRAGHTLHAL
MEEHGLRRGHDYGCANIVRCRPPENRKPTDIEIGMCLPNLANTIANARPVAVLAVGETAT
RAITGIRGLSENLRFLRYHDHDPIPAEMLCNLNIRAMWPHGAKLFPMPHTSPLAWNRNAP
DGRKWSAWGREQVSLLAALLPKG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggataattgtcagcggtgtccatccctctgcgcctcccgcacccaaatcgtgttcccc
gacctgcctgaatttggcaggtattgccgcgtcctggtgattggcgaggccccgggtgcc
gatgaggacgcccagggcaagggtttcgtaggccgagccggacacaccctgcatgcgctg
atggaagagcacgggctgcgacgcgggcatgactatggatgcgccaacatcgtgcggtgt
cggccgccggagaaccggaagccaaccgatatagaaataggcatgtgtttgccgaatctc
gcaaacaccattgccaatgcccgccccgttgccgttcttgccgtgggcgaaacagcaact
cgcgccattaccggcatccgtggtctttcggagaatctacgattcctgcggtatcatgac
cacgatccaatccctgcggaaatgctttgcaacctcaatatccgggcgatgtggccacat
ggggcgaaacttttccccatgccgcacacgagtcccttggcctggaaccgcaacgcgccg
gacggccggaagtggtcggcttggggccgggagcaggtatcgctattggcggccttgttg
cccaagggataa
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