Acidithiobacillus ferrooxidans ATCC 23270: AFE_2342
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Entry
AFE_2342 CDS
T00810
Name
(GenBank) RNA polymerase sigm-70 factor family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
afr
Acidithiobacillus ferrooxidans ATCC 23270
Brite
KEGG Orthology (KO) [BR:
afr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afr03021
]
AFE_2342
Transcription machinery [BR:
afr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AFE_2342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
DUF1780
HTH_20
Phage_TAC_7
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ACK77975
UniProt:
B7J6A8
LinkDB
All DBs
Position
2087899..2088756
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AA seq
285 aa
AA seq
DB search
MHTEARELAGSDIPEMGPVTDPPPLSDFVDDENGGPFLSQKQELQLIRRLRRGDECARAT
LISAHMPLVRAVARGYRNKGLSQEDLLQEGYMGLLRAVDRFQEGLGTRFSSYATWWIREA
MQRALIRSRFIRLPDYLAKSLHAYMQSGAEEDSDAGVRREQRREALGVRESTMRALDFAD
IRVFSLDEEISDGPGRIEQVTGDVASPDSDYDRDAICKALREHLTELNEKQREVMVFRYG
MHGDAPMTLEAVAERMGVSREAVRQLQVRALTRLRQSLSESGWGC
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgaagccagagagttagcggggtcagatattccggagatgggtccggtcacc
gatccgccgcctctgagtgatttcgtggacgacgaaaatggcgggccgtttctcagccag
aagcaggagctgcaactcatccggcgcttgcgtcggggtgacgagtgcgcccgcgccaca
ctgatctccgcgcacatgccgttggtgcgggcggtcgccaggggttatcgcaataaagga
ctcagtcaggaagacctccttcaggagggttacatgggtctactgcgtgccgtcgaccgc
tttcaggaaggcctcggcacacgtttctccagttatgcgacctggtggatccgggaggct
atgcagcgggcgctcatccgttcccgcttcatccgcctgcccgattaccttgccaagtcc
ctgcacgcttatatgcagagcggggcggaggaagacagcgacgccggtgtgcgcagggag
cagcggcgtgaagccctaggggtgcgcgagagcaccatgcgcgccctggatttcgccgat
atccgcgtcttctcgctcgacgaggaaatatccgacggaccgggccgcatcgaacaggtg
accggcgacgttgccagtccggacagcgactatgaccgtgatgccatctgcaaggcactg
cgggagcatctgaccgaactcaatgaaaaacagcgggaggtcatggtctttcgctacggc
atgcatggtgacgcgcccatgaccctggaagccgtcgccgagcgtatgggcgtcagtcgc
gaggcggtaagacagttgcaggtgcgggcactgacccgtctgcgtcagtcgttgagcgag
agcggctggggttgctga
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