KEGG   Aythya fuligula (tufted duck): 116487709
Entry
116487709         CDS       T07966                                 
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
aful  Aythya fuligula (tufted duck)
Pathway
aful03082  ATP-dependent chromatin remodeling
aful03083  Polycomb repressive complex
aful04110  Cell cycle
aful04330  Notch signaling pathway
aful04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:aful00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116487709 (HDAC2)
   03083 Polycomb repressive complex
    116487709 (HDAC2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    116487709 (HDAC2)
   04350 TGF-beta signaling pathway
    116487709 (HDAC2)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116487709 (HDAC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aful03036]
    116487709 (HDAC2)
Enzymes [BR:aful01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     116487709 (HDAC2)
Chromosome and associated proteins [BR:aful03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     116487709 (HDAC2)
   HDAC complexes
    Sin3A-HDAC complex
     116487709 (HDAC2)
    BRAF-HDAC complex
     116487709 (HDAC2)
    REST complex
     116487709 (HDAC2)
    SHIP complex
     116487709 (HDAC2)
    MiDAC complex
     116487709 (HDAC2)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     116487709 (HDAC2)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116487709 (HDAC2)
  Chromatin remodeling factors
   NuRD complex
    116487709 (HDAC2)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 116487709
NCBI-ProteinID: XP_032040739
UniProt: A0A6J3CRK1
LinkDB
Position
3:complement(73056011..73079456)
AA seq 488 aa
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattactatggacaagggcatccaatgaagcctcataggatccgaatgacccac
aacttgctgctaaattatggcttatacagaaaaatggaaatttaccgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcagatgcagagatttaacgttggagaagat
tgtcctgtgtttgatggcctgtttgagttttgtcagctatcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaactgggcgggaggtctt
caccatgccaagaagtcagaagcatctggtttctgttatgttaatgatattgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtacggtgaatattttccgggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaacttcccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatccaaagtaatggagatgtatcagcccagtgctgtggtatta
cagtgtggagcagattcattgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaagtgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggtggatatactattcgcaacgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgattactttgagtattttggacca
gattttaagcttcatattagtccatccaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttgtttgaaaacttgcgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgacgaagag
ttttcagattctgaagatgaaggggagggtggacgacgaaatgttgcagatcataaaaaa
ggagcaaagaaagccaggatagaagaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacggacaccaaaggagca
aaatcagaacagctcagcaacccttga

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