Aythya fuligula (tufted duck): 116487709
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Entry
116487709 CDS
T07966
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aful
Aythya fuligula (tufted duck)
Pathway
aful03082
ATP-dependent chromatin remodeling
aful03083
Polycomb repressive complex
aful04110
Cell cycle
aful04330
Notch signaling pathway
aful04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116487709 (HDAC2)
03083 Polycomb repressive complex
116487709 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116487709 (HDAC2)
04350 TGF-beta signaling pathway
116487709 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116487709 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aful03036
]
116487709 (HDAC2)
Enzymes [BR:
aful01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
116487709 (HDAC2)
Chromosome and associated proteins [BR:
aful03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
116487709 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
116487709 (HDAC2)
BRAF-HDAC complex
116487709 (HDAC2)
REST complex
116487709 (HDAC2)
SHIP complex
116487709 (HDAC2)
MiDAC complex
116487709 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
116487709 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
116487709 (HDAC2)
Chromatin remodeling factors
NuRD complex
116487709 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
116487709
NCBI-ProteinID:
XP_032040739
UniProt:
A0A6J3CRK1
LinkDB
All DBs
Position
3:complement(73056011..73079456)
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattactatggacaagggcatccaatgaagcctcataggatccgaatgacccac
aacttgctgctaaattatggcttatacagaaaaatggaaatttaccgaccccacaaagca
actgctgaggaaatgaccaagtaccatagtgatgaatacatcaaatttctccgatcaata
aggcctgacaatatgtctgagtacagcaagcagatgcagagatttaacgttggagaagat
tgtcctgtgtttgatggcctgtttgagttttgtcagctatcaactggaggctctgttgct
ggggcggtaaaattgaacagacaacagacagacatggctgttaactgggcgggaggtctt
caccatgccaagaagtcagaagcatctggtttctgttatgttaatgatattgtgcttgcc
atccttgagttactgaagtatcaccaaagagtgttgtatattgatattgatatccatcat
ggtgatggtgttgaagaagcattttataccacagatcgtgtcatgacagtatcattccat
aagtacggtgaatattttccgggcacaggggaccttagggacattggtgctggaaaaggc
aaatactatgctgtcaacttcccaatgagggatggtatagatgatgaatcatatggacag
atattcaaaccaattatatccaaagtaatggagatgtatcagcccagtgctgtggtatta
cagtgtggagcagattcattgtctggtgacaggctgggatgctttaatcttactgttaaa
ggtcatgctaagtgtgtggaagttgtaaagacttttaacttgccattgctgatgttagga
ggaggtggatatactattcgcaacgttgctcgatgctggacatatgaaactgctgttgcc
ttagattgtgaaattcctaatgagttgccatacaatgattactttgagtattttggacca
gattttaagcttcatattagtccatccaatatgactaatcagaatacaccagaatatatg
gagaagatcaagcaacgcttgtttgaaaacttgcgcatgttacctcatgcacctggtgta
cagatgcaggccattcctgaagatgctgttcatgaagatagtggagatgaggatggagaa
gatccagacaaacgcatttctattcgagcatctgataagcgcatagcctgtgacgaagag
ttttcagattctgaagatgaaggggagggtggacgacgaaatgttgcagatcataaaaaa
ggagcaaagaaagccaggatagaagaagacaaaaaagagacagaggacaaaaaagcagat
gttaaggaggaggataaatccaaggacagcagtggtgaaaagacggacaccaaaggagca
aaatcagaacagctcagcaacccttga
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