Aythya fuligula (tufted duck): 116490853
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Entry
116490853 CDS
T07966
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aful01002
]
116490853 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aful04121
]
116490853 (USP40)
Enzymes [BR:
aful01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116490853 (USP40)
Peptidases and inhibitors [BR:
aful01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116490853 (USP40)
Ubiquitin system [BR:
aful04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116490853 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116490853
NCBI-ProteinID:
XP_032046306
UniProt:
A0A6J3D4J0
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All DBs
Position
6:10273868..10306741
Genome browser
AA seq
1257 aa
AA seq
DB search
MVKKVKDCFVFTMFGDLFEEDFSFISNNHCGKGKKSKPRDSEPPAPRDFTNLSGIKNQGG
TCYLNSLLQTLLFTPEFREALFSLGPEELGTLDDINKPDAKVRIIPLQLQRLFAQLLLLD
QQAASTTDLTESFGWNSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTVVN
QIVCKECKNISERQEDFLDLTVAVKGVAGLEEALWNMYVEEEYFENENLYRCGACDKLVE
ASKSAKLRKLPPFLTISLLRFNFDFEKCERYKETSCYTFPIQINLRPFCEQTEMDDSEYM
YELFSVIIHKGGCYGGHYHVYIKDVDELGNWQLQEDEDRLIEDKALRENENAKEAENPLA
VLKGILSEEESKQIPVDQLGQKLLEKKKVSWNKKYRKQYGALRKYLQNHPQIFQFSPDKN
KVGLKEKYKLPFKSDSQGLDLQSPSQKNDIQWNLEKTPTRLEETSVGCHWFDLNDSKVQP
IKEEDIEQQFQGKESAYMLFYRKSRLKRPPEARGNPRYQIPEHLLNEMNAANTELQKKRA
ECDSANNGIDLHLHLSSCYKFYNGALHPSLTWKESVLDLTIDRRKTLGDLRQSIFQILES
WEGDMILSNAKPLPAGLHLYEILDGDELTLDCFGLADGADIFVWNGKEVGGTKVMTGPDH
EPVIINVLRLAEYNEGGKGQHFTESQHIFPCSTKLEDLHRALAPSGGIILKNGSGPDREG
KNWEVLLEEQMKETIRSVGLTDGCSVLILDSHDQSFVNVSSGNLTAFTYDISWLQVKNFC
GTEDEEKHVKITATIETVMSDIKMKAIQELQLDEELASDSCLRPVSGNGKLLSPVPEDYT
VKEAELKMGSLLGLCRGKAPTSTQLFLYFIIGDDQHMGPEMEIVVEETASVKECLNLMLE
KSGLSGDSWHLRRIDWCYEAGEALSQENATLKELNVCRGDTLVITEGKLPPKGFLKIPIW
WFKPSSHMKHGENGQDQVNGLACRMDDLQVSPAGDSPECIQTDTDLCYAGSIEIAGEATL
EDLKMQAMTLPCRQEHVVPLPTFLRAWTVESKRPGKLLRHNKQQLNEYKLGARVAICIEP
LQKEENLGPHELLLRVQMGIPGERDYYDSVDLVWDISKECTTWALRQRVASHYCLPVDKI
EIAKYFPEKFEWLPISSWTQQISKRKRKKKQESLQSAPYHLKDGDTIGVKNLLLDDSKDF
STVRDDLGKEKQRQLALEKKKSRQAERLQDHVLSEEKLNTKQRKPEVALSINVGVFR
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaggtgaaggactgttttgtcttcacaatgtttggggacttatttgaagag
gatttttcctttatttcaaacaatcattgtggaaaagggaagaaatcaaagcccagagat
tctgagcctccagctcccagagatttcaccaacctaagcggtatcaaaaatcaaggtggg
acctgctacctcaattcccttctgcagacactgcttttcacacctgaatttagagaggca
ctgttctctctaggacctgaagagcttggaactctggatgatatcaataaaccagacgca
aaggttcgaataattccactgcaacttcaacggttatttgctcagcttctgctcttagac
cagcaggctgcgtctacaacagaccttaccgagagctttgggtggaacagcaatgaggaa
atgaggcagcacgatgtgcaggaattaaatcggattctgttcagtgctttggagacttct
cttgtggggacttcgggtcacgaccttattaatcgattgtaccatggaactgttgtcaac
cagattgtttgtaaagaatgcaagaatatcagtgagagacaggaagatttcttagaccta
acagtggcagtaaaaggtgtagctggcttggaggaggccctgtggaacatgtatgtggaa
gaagagtactttgaaaatgagaacttgtatcgatgcggagcctgtgacaaacttgttgaa
gcttcaaagtccgctaaactacgtaagttgcctccctttctcaccatttctctcctgaga
tttaactttgactttgagaagtgtgaacgatacaaggaaactagttgctatacgttccct
atccagataaacctgaggcctttttgtgagcagactgaaatggatgattcagagtacatg
tatgagctcttctctgttattatacataaaggtggctgctatggaggacactatcatgtt
tatatcaaagatgtggacgaattaggaaactggcaattacaagaagatgaggataggcta
attgaagataaggctttaagagagaatgaaaatgccaaagaagcagaaaatccactggca
gtgttgaaagggattttatcagaggaagaatctaaacaaatacctgtggatcaattaggg
cagaagttactggagaaaaaaaaggtgtcctggaataagaaataccgaaaacaatatgga
gcattacgaaagtatttgcaaaatcatcctcagatatttcagttcagtcctgacaaaaat
aaggttggtctgaaagaaaaatacaagctcccatttaaatcagattctcaaggacttgat
ctccaaagtccttctcagaagaatgatatccagtggaatttagaaaaaacacctacaagg
ctagaggagacttctgttggttgccattggtttgatctgaatgattcaaaagtccaaccg
atcaaggaggaggatattgagcaacaatttcagggtaaagagagtgcctacatgctcttt
tatcgaaagtcacggctgaaaagacctcctgaagctcgaggaaatccaagataccaaatt
cctgaacatcttctgaatgaaatgaatgctgctaatactgagctgcaaaagaagagagcg
gaatgtgactcagcaaacaacggtattgatctgcatctccatttgagctcgtgttacaaa
ttttacaatggagctttgcatccttcacttacttggaaagagagtgttctggatctgact
attgacagaagaaaaacactaggagatcttcgacagtcaatattccagatattggaatct
tgggaaggagacatgattctcagtaatgccaaacctttaccagcaggactgcatctttac
gagattcttgatggagatgagctgacactggactgctttgggctggctgatggagcggac
atttttgtgtggaatgggaaagaggttggaggcacaaaggtgatgacaggccctgatcat
gaacctgtgatcataaacgttcttcgtctggcagagtataatgaaggagggaagggtcaa
cacttcacagaatcgcagcacatctttccgtgcagcacaaaactggaggatctgcacagg
gccttagcaccatcaggaggaatcatcttaaagaatggctcaggacctgatagagaaggc
aagaactgggaagtacttcttgaagaacagatgaaggaaacaatcagaagcgttggtctg
acagatggatgttcagtgctaatcttagacagccatgaccagagctttgtgaacgtttca
agtggcaatttgactgcttttacatacgacatcagctggctccaagttaaaaacttctgt
ggaacggaagatgaagagaaacatgttaaaattactgccaccattgaaacagtgatgtca
gatatcaaaatgaaagcaatacaggagcttcaactagacgaagagctagcaagtgacagt
tgtcttagacctgttagtggaaatgggaaacttctctctccagtgcctgaagattatact
gtcaaggaggcggaactgaaaatgggaagcttgcttgggctgtgtcggggaaaagctcca
acttccacacagctcttcttatattttattattggggatgaccaacatatgggccctgag
atggagatagttgtagaagagactgcctctgtgaaagaatgtctaaatttaatgctggaa
aaatctggattatcaggtgacagctggcatttgagaaggattgactggtgctatgaagca
ggggaagcattaagtcaggaaaacgccaccctgaaggaacttaatgtttgtagaggagat
actttggttataactgaaggaaagcttccaccaaagggctttctgaaaattcccatctgg
tggttcaagccttcaagccatatgaaacatggagaaaatggacaagaccaagtgaatggg
ttggcctgcaggatggacgatttgcaggtgtctcctgctggagactcaccagaatgcatc
caaacagacacggatctgtgttacgctggcagtatagaaatagcaggcgaagccactttg
gaagatctgaagatgcaggctatgaccttaccatgccgtcaggagcacgttgtcccactg
cccacatttctcagagcctggacagtggaaagtaagcgcccaggcaagcttttacgacac
aacaagcagcaactcaatgaatataaactgggtgccagagtggcaatctgcatagaacct
ttgcaaaaagaagaaaacttgggcccacatgaactgctgcttcgagtacagatgggcata
ccaggggagagggactactatgactccgtggatttggtgtgggatatctccaaagaatgc
actacctgggcactgaggcaaagagtggcttctcactattgtctccctgtagataaaatt
gaaatagccaaatacttccctgaaaaatttgagtggctgccaatatctagctggactcag
caaatttcaaagagaaaacggaagaaaaaacaggagagtttacagtcagcaccttatcat
ctgaaagatggagataccattggggtgaagaatcttctccttgatgacagtaaggacttc
agcacagtgagagatgatcttggaaaggagaaacaaaggcagcttgcattagaaaaaaag
aaaagtcggcaagctgaacgcttacaggaccatgttttgtctgaggaaaaactgaatact
aagcaacgtaaaccagaagtggctctttctatcaatgtgggagttttcagatag
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