Aythya fuligula (tufted duck): 116496654
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Entry
116496654 CDS
T07966
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
aful
Aythya fuligula (tufted duck)
Brite
KEGG Orthology (KO) [BR:
aful00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aful03016
]
116496654 (TSEN54)
Transfer RNA biogenesis [BR:
aful03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116496654 (TSEN54)
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
Motif
Other DBs
NCBI-GeneID:
116496654
NCBI-ProteinID:
XP_032055782
UniProt:
A0A6J3E1L5
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Position
18:3931072..3940143
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AA seq
520 aa
AA seq
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MEPGGSRSLSEAELPEARGRSGAPRYRGGPKEAAPDGSEEQAERLRLCRDEQWRWLAEER
VERLGNLVKAEWKPEKGIVELQSPAGKFWHTMGFSERGKQCLLPEEALYLLECGSVQLFY
RNLPLSIQEAYEMLLTQEEMSLSHYQVFSHLKQLGYIVLRFNPSTVPSPYERQLNLESHC
KSSGKHERKRRRSSSPGSLEKKHKVSEDLPEAEGTPKKAGDDCGDPSCLPLDEKPLSEQP
KELDAGNGEEQSSPVPLDTGQKNSLSPSRSRAGDPEASSTGTRAPRWDFTTIILPNVAPD
QPCTHLPSPDSGLLPENVPGREVDAASWCKRINLKQEKLSRKEREQLERESRYKSSVNAD
REVRRCSSWQEYKALLKQRSQQRVWRRPPHLWDQAVTPLLRPEEATSTAAILQQISVLQP
SHILDGASRLQEDPESLKISFNVYQPDAVAKFKKTNPGKPYVRMCVQSFEEQIPSLRALK
QVTYQSGDVPVVFALVEYGDIAFHSLKEFKLPVDVNHSSY
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggcggctcgcggagcctgagcgaggcggagctgccggaggcccgcgggcgg
agcggggccccccggtaccgcggcggcccgaaggaggccgcgcccgacggctcggaggag
caggcggagaggctgcggctctgccgggacgagcagtggcggtggctggccgaggagcgt
gtggagcgcctgggaaatctggtgaaagctgagtggaagccagaaaagggcattgtggag
ctgcagtcccctgcggggaagttctggcacaccatggggttctcagagcgtggcaaacag
tgcctgctgcccgaggaggctctgtacctgctggagtgtggctctgttcagctcttctac
aggaatctgcccttgtcgatccaagaagcctacgagatgctgctgacccaggaggagatg
agcctgtcccattaccaggttttcagccacttgaagcaactgggttatattgtactgaga
ttcaaccccagtactgtcccgtccccctacgagaggcagctgaacctggaaagtcactgc
aagagctcagggaaacacgagcgcaaaaggaggaggagttccagccctgggtcgcttgag
aagaaacataaagtgtctgaggaccttccagaagctgaagggacccccaaaaaagctgga
gatgactgtggagatcccagctgccttcccttggatgaaaagcccttgtcagagcagcca
aaggaattggatgctggcaatggagaggagcagtcgagcccagttcctcttgacacagga
caaaagaactccctgagcccctccaggagcagggctggagaccccgaggcaagcagcact
ggcacccgtgcgccacgctgggattttaccaccatcatcttgccaaatgtggccccagat
cagccgtgcacacatctgccctcgcctgacagcgggcttctgccagaaaatgtgccaggg
agggaagttgacgcagcttcctggtgtaaacgcatcaacctaaaacaggagaagctgtca
cggaaggagagggagcagctggagagggaaagcaggtacaagagcagtgtcaatgctgac
agggaggtgaggcgctgctccagctggcaggagtacaaagcccttttgaagcagaggagc
cagcagagggtttggagacgaccgccgcatctctgggaccaggctgtcaccccgcttctg
cggccagaggaagcgacttccacagctgcgatcctccagcagatcagcgtgctgcagccc
tcccacatcctggatggagcctcccggctgcaggaggacccagagagcttgaagataagc
ttcaatgtgtaccaacccgatgctgtggccaagtttaagaagacaaaccctgggaaaccg
tacgtcaggatgtgtgttcagagctttgaggagcagatcccatcccttcgggctttgaag
caggttacctatcagagcggggacgtcccggtggtctttgcactggtggaatacggagat
attgccttccactcgctgaaggaattcaagctgccagttgatgttaatcacagcagttac
tga
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