Alicyclobacillus ferrooxydans: JZ786_14160
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Entry
JZ786_14160 CDS
T07322
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
afx
Alicyclobacillus ferrooxydans
Pathway
afx03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JZ786_14160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afx03400
]
JZ786_14160
DNA repair and recombination proteins [BR:
afx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JZ786_14160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Imm61
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
QSO45695
UniProt:
A0A9X7Z5W9
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All DBs
Position
complement(3024711..3025559)
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AA seq
282 aa
AA seq
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MQTMWKGSLSFGLVNVPVKMFAATESKDVSFKYLHKACQTPIKYTRTCPHCDVTVAWEDI
VRGYEYEPNRFVVFTDEEMQELQKQRAQTIDILEFVELSEVDPIYYDKTYYLAPDSSGVK
AYRLLQEAMDKTGKVAVAKTVIRTKEVLACVRVGKGVIVLETLFWPDEVRATSELPNIHT
AAEPNDKELEMAMTLINQLHTTFDADKYKDTHREETLAAIQQKIEHDEISTAPAVVKPAG
NIVDLMAALQESIRQTTPQQEATPKRTRKSTGARRQAAKKTS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaacgatgtggaagggatcactcagtttcggcctagtcaacgtgcccgtcaagatg
tttgccgctacagagtcaaaggatgtgtccttcaaataccttcataaggcgtgtcaaaca
cccatcaaatacaccaggacttgtccgcactgtgatgtcaccgtagcgtgggaggatatt
gtgcgcggttatgagtacgagccaaaccggtttgtcgtctttacggacgaggaaatgcag
gagttgcaaaaacagcgtgcacaaaccatcgacatccttgaatttgtggagctctcagag
gtcgatccgatttactacgacaagacgtattacttggcacctgattcatccggagtcaag
gcctaccgactgttgcaagaagcaatggacaaaaccggtaaagttgccgtggcgaaaacg
gtcatccgcacgaaggaagtgctcgcttgcgtccgtgtagggaaaggggtcatcgtactc
gagaccctgttttggccagatgaggtgcgagcgacttcagaactgccaaacatccacacc
gctgcagagccaaatgacaaggaactggagatggcgatgacgctcatcaaccaattgcac
accacctttgatgcggacaagtacaaagacacgcaccgtgaggaaacacttgccgctatc
cagcagaagatcgaacacgacgagatatccaccgcacccgcggtagtaaaaccggcaggc
aatattgttgacctgatggcagccttacaagagagcattcgccagacgacaccacaacaa
gaagccactccgaagagaacaagaaagagcacaggtgcacgtcgacaggccgccaaaaag
acctcttaa
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