Agrobacterium sp. RAC06: BSY240_4409
Help
Entry
BSY240_4409 CDS
T04501
Name
(GenBank) putative DNA metabolism protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY240_4409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_4409
Enzymes [BR:
agc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BSY240_4409
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY240_4409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
AOG11377
UniProt:
A0A1B3P193
LinkDB
All DBs
Position
4597480..4598940
Genome browser
AA seq
486 aa
AA seq
DB search
MRTVTLEGRGAFDEWRDAARSLLADRVKPDQVRWQLSGEGGDLFGAMPPETGPVDVPSGI
VVPKGFMEAAEAAICHTDPARFSLLYRILWRLQAERSLLQVSSDPDVSDLIRLIKNIRRD
SHKMKAFVRFREVEGVQAGRRRFVAWFEPEHFIVSRTAGFFQRRFTDMDWLIATPKGSAA
WNGQALKTSREPAARPEAEDETDELWRTYFANIFNPARLKIKAMQSEMPKKYWKNMPEAS
LIPDLIAGAERRVAEMAERQASQPPAFHERLQAQWREREDEEASVNLPPLERLREEAASC
TRCPLHCHATQTVFGEGPEDSEIMFVGEQPGDTEDLAGKPFIGPAGQVFDEAVAAAGIDR
TQVYVTNAVKHFKYERRGKRRIHMRPEAGEVAHCRWWVSKEIEIIRPRIVVALGATAYLS
LTGESRPIAEVRGMPIPMQDNRMLLVTTHPVAILRMPDEDLKARSLDAFRSDLQGVRRLF
DTLPAL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgtcacgctcgaagggcgaggggcgttcgacgagtggcgcgatgctgcacgt
tcactcctggctgatcgggtgaaacccgatcaggttcgctggcagctttctggcgagggg
ggcgatctcttcggcgcgatgccgcctgagaccgggcctgtcgatgtgccttccgggatc
gtcgtgccgaagggcttcatggaggcggcggaggcggcgatctgccatacggatccggct
cgattttcacttctctatcgcattctctggcggctgcaggcggaacgcagccttctgcag
gttagctccgatcctgacgtctcggacctcatccgcttgatcaagaatatcaggcgcgac
agccacaagatgaaggccttcgtgcggttccgcgaagtcgagggtgtgcaggcgggacgg
cggcgattcgttgcctggttcgagccggagcatttcatagtgtcgcgcactgccggcttc
ttccagcggcgcttcaccgacatggactggctgatcgcgacgccgaagggctcggccgcg
tggaacgggcaggcgctcaagacgtcgcgcgagccggccgcccggccggaagcggaggat
gagaccgacgagctctggcggacctatttcgccaatatcttcaatccggctcggttgaag
atcaaggcaatgcagtcggaaatgccgaagaaatactggaagaacatgccggaggcctcg
ctcattccggatctgattgcgggtgcggagcggcgggtcgccgagatggcagagcggcag
gcgagccagccgccggcctttcacgagcggctacaggcgcagtggcgtgaacgagaagac
gaggaggcgtcggtcaatctgccgccgctcgaacggctgcgggaggaagcggcaagttgc
acgcgttgcccgctgcattgccatgcgacacagacggtgttcggcgaggggccagaggat
tcggagatcatgttcgtcggggagcagcccggcgataccgaggatctggcgggaaagccg
ttcatcggtccggctggccaggtcttcgatgaggccgtggcggcggcagggatcgaccga
actcaggtctacgtcaccaatgccgtcaagcatttcaaatacgagcggcgcggcaagcgg
cggatccatatgcgtccggaagccggtgaggtggcgcattgccgctggtgggtctcaaag
gagatcgagatcatccggccgcgcatcgtcgtggcgctcggcgcgaccgcctatctgtcg
ctgacaggtgagagccggccgatcgccgaggtgcggggcatgccgatcccgatgcaggac
aaccgaatgctgcttgtcacgacgcatccagtggcgatcctcaggatgcccgacgaggat
ctgaaagcgcgcagcctagatgcctttcggtcggatcttcaaggcgtgcggcggcttttc
gacacgctgccagccctttga
DBGET
integrated database retrieval system
