Agrobacterium sp. RAC06: BSY240_965
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Entry
BSY240_965 CDS
T04501
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
agc
Agrobacterium sp. RAC06
Pathway
agc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSY240_965 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agc03021
]
BSY240_965 (rpoA)
03400 DNA repair and recombination proteins [BR:
agc03400
]
BSY240_965 (rpoA)
Enzymes [BR:
agc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSY240_965 (rpoA)
Transcription machinery [BR:
agc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSY240_965 (rpoA)
DNA repair and recombination proteins [BR:
agc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSY240_965 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
AOG08144
UniProt:
A0A1B3NS46
LinkDB
All DBs
Position
complement(1001052..1002062)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLLMTIETDGSVTGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaattggcaggaactgatcaagccgaacaaggtggaattctcctcctcc
ggccgcaccaaggcgacgctcgtcgctgagccgcttgagcgtggcttcggcctgacgctc
ggcaacgctctgcgtcgcgttctcctgtcgtcgcttcgtggtgcagccgtcacggctgtc
cagatcgacggcgttctgcacgagttctcgtctatcccgggcgttcgcgaagatgtcacc
gacatcgtcctgaacatcaaggaaatcgccatcaagatggacggcgacgatgccaagcgc
atggttgtccgcaagcagggtccgggcgttgtaaccgccggtgacatccagacggtcggc
gacattgagatcctgaaccccaaccacgtgatctgcaccctcgacgagggagccgaaatc
cgtatggagttcacggtgaacaacggcaagggttacgtgccggccgagcgcaaccgcgcg
gaagatgcaccgatcggtctcatcccggtcgatagcctctattcgccggtcaagaaggtg
tcctacaaggtcgaaaacacccgtgagggccaggttctcgactatgacaagctgctgatg
accatcgaaaccgatggttccgtcaccggtgaggacgctgtcgctttcgctgcccgcatc
cttcaggaccagctcggcgttttcgtcaacttcgacgaaccgcagaaggaagccgaagag
gaagccgtcaccgagctcgccttcaacccggcgctgctcaagaaggtcgacgagctggag
ctttcggtccgctcggcaaactgcctgaagaacgacaacatcgtttacatcggcgatctg
atccagaagaccgaggcagagatgctgcgcacgccgaacttcggccgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggtatggaagtaccggcatgg
ccgcccgagaacatcgaagatctcgcgaagcgttacgaagaccagtattaa
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