Accipiter gentilis (Northern goshawk): 126042622
Help
Entry
126042622 CDS
T08649
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
agen
Accipiter gentilis (Northern goshawk)
Brite
KEGG Orthology (KO) [BR:
agen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
agen00536
]
126042622
Glycosaminoglycan binding proteins [BR:
agen00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126042622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
126042622
NCBI-ProteinID:
XP_049665952
LinkDB
All DBs
Position
9:3930776..3992807
Genome browser
AA seq
643 aa
AA seq
DB search
MGIPGRPGLKGQPGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGQK
GEMGAAGPRGQPGPPGQKGEKGQCAEYPHREYLSTTLAALRSNQILTLKGEQGQAGIQGP
PGPPGPPGPTGPAGPEGTPGQPGPIGPPGRVGEPGKPGRDGKGLPGPPGPKGDPGIQGYP
GRKGEVGESGLPGAHGLPGATGPKGAPGLATAGLKGEPGTPGEKGDPGVPGRMGPPGLPG
KRGQRGEKGRAGEPGLPGLPGTKGEKGNAENALAGGKGEPGPPGLPGPPGPKGEAGDIGQ
PGAAGSRGEKGEPGSPGDQGPMGPRGPKGEPGKDDMMDYDGNISEALQEIRTLALMGPPG
LPGVAGPPGPPGQKGEIGLPGPPGHDGEKGPRGKPGEMGPPGPHGLPGKDGPPGIKGEPG
HIGVTGEKGDKGEPGQAGSPGLDGPTGEKGERGDQGMPGPSGLPGPIGLPGLTGEKGEPG
ERGDKGNPGESISGPPGPQGPPGPPGLQGLPGPKGEAGIDGMKGEKGAQGEKGDRGPLGL
PGASGLDGRPGPPGTPGPIGVSGPAGPKGERGSKGDPGVVGPMGPAGLPGLQGLPGDKGI
RGERGKKGSRGSKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctgggcggccgggactaaaagggcaacctggagagaagggtgcgccagga
gaagcgggcatgtctatcatcgggccccgtggtccacccggacagcctggaacaagaggt
tttcctggattcccgggtcctattggcttggatggcaaaccgggtcatcctggacagaag
ggcgagatgggtgctgcaggtcccaggggacaacccggacccccaggacaaaaaggagaa
aagggtcagtgtgcagagtacccgcacagggaatacctaagtaccacccttgcagccctg
cgctctaaccagatccttacgctgaagggtgaacaaggacaagcgggaatccaaggtccc
ccggggccccctggcccaccagggcccactggaccagctggacccgaaggaaccccagga
cagcccgggccaattgggccgcctggcagagtgggagaaccggggaagcctggcagagac
ggaaagggcttacctgggcctcctggaccaaagggagaccctggaattcagggataccct
ggcagaaagggtgaggtgggtgagtcaggcctgcccggtgcacatggcctcccaggagct
actggccccaagggcgctcctgggctggccaccgcaggactgaagggcgagcccgggact
ccaggagaaaagggagatcctggagtcccagggaggatgggccccccaggtttgccaggg
aagagggggcagcggggtgagaagggacgagctggtgaacctgggcttcctggactccct
ggcacgaagggagagaagggaaatgctgagaatgccttggcgggaggtaaaggagaacct
ggccctccaggtctgcctgggccccctggaccaaagggagaagctggtgacattggccag
cctggtgctgcagggtcacggggcgaaaagggggaacctggttcaccgggagaccaggga
cccatgggcccaaggggccccaaaggagagcctgggaaggacgatatgatggactatgat
ggtaacatcagcgaagctctccaggaaatacgaactttggccttgatgggacccccagga
cttccgggtgtggctggacctccagggccaccgggacagaagggtgaaattggcttgcca
ggtcctccaggccatgatggagaaaagggaccacgtggcaagcctggagaaatgggtccc
cctggccctcatggactgccagggaaggatggaccacctggaataaagggagagccaggc
catattggggtcacaggagaaaagggcgataaaggagagccgggacaagctggctcaccg
ggtcttgatggccccactggagagaagggcgaacgaggtgaccaagggatgccaggaccg
tcaggattgccgggtcccattggacttccaggactgacaggagagaagggtgaacctggg
gagcgtggagacaaaggaaatccaggagaatcgatatctggcccccctggaccccaaggc
ccaccaggacctccaggtcttcagggcctcccaggaccgaagggggaagcagggattgat
ggaatgaaaggagagaagggtgcccagggtgaaaaaggagacagagggccactgggatta
cccggtgcttcaggtttagacggcaggcctggaccaccgggtactccaggaccaattggg
gtttcgggaccagcaggaccaaaaggagaaaggggcagtaaaggagatcctggagttgta
ggaccaatggggccagcagggcttcctggtttacaaggtctacctggtgacaaaggaatc
cggggggagaggggcaagaaaggctctagagggtctaaaggggataagggagaccaagga
gcgcctggattagatgcaccctgtccgttgggggaagacggccttccagttcaaggctgc
tggaataagtga
DBGET
integrated database retrieval system