Aggregatibacter sp. oral taxon 513: J5A60_08610
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Entry
J5A60_08610 CDS
T08731
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
agj
Aggregatibacter sp. oral taxon 513
Pathway
agj00540
Lipopolysaccharide biosynthesis
agj01100
Metabolic pathways
agj01250
Biosynthesis of nucleotide sugars
Module
agj_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
agj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
J5A60_08610 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
agj01005
]
J5A60_08610 (rfaD)
Enzymes [BR:
agj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
J5A60_08610 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
agj01005
]
Core region
J5A60_08610 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
ThiF
KR
Motif
Other DBs
NCBI-ProteinID:
QUC05777
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Position
1793850..1794773
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AA seq
307 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDMGRKDILVVDNLKDGTKFINLVDLDIADYCDKEDFIASI
IAGDDLGDIDAVFHEGACSATTEWDGKYIMHNNYEYSKELLHYCLDRQIPFLYASSAATY
GDKTKFREEREFEGPLNVYGYSKFLFDQYVRAILPEVQSPVCGFRYFNVYGPREGHKGSM
ASVAFHLNNQILKGENPKLFAGSENFRRDFVYVGDVAAVNIWCWQNGISGIFNCGTGNAE
SFAEVAKAVIKFHGKGEVETIPFPEHLKSRYQEYTQADLTKLRATGYDKPFKTVAEGVAE
YMAWLNK
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaaccggtggtgcaggctttattggtagcaatatcgtcaaagcattaaac
gacatgggccgtaaagacattttagtggtagataacttaaaagacggtacaaaattcatt
aatttggtggatttggacatcgccgattattgtgacaaagaggatttcatcgcctccatt
atcgccggcgatgatttaggcgatatcgatgccgttttccacgaaggcgcatgttctgcg
accaccgaatgggacggcaaatacatcatgcataacaactacgaatactccaaagagttg
ttgcattattgcttagatcgccaaatcccgttcctctacgcgtccagtgccgccacttac
ggcgacaaaaccaaattccgcgaagaacgcgaatttgaaggcccattgaacgtgtacggc
tattccaaattcttattcgaccaatatgtacgcgccattttacctgaagtgcaatcaccg
gtgtgcggcttccgttatttcaacgtgtacggtccacgtgaaggccacaaaggttccatg
gcaagcgtagccttccatttaaacaaccaaatcctgaaaggtgaaaatccaaaattattt
gccggcagtgagaacttccgccgtgatttcgtctatgtgggcgatgttgctgccgtaaac
atttggtgttggcaaaatggcatttccggtattttcaactgtggtaccggaaacgcggaa
tcttttgctgaagtagcgaaagcggtgattaaattccacggcaaaggcgaagtagaaacc
atcccattcccggaacatttaaaatcccgctaccaagaatacacccaagcggatttaacc
aaactccgtgccaccggctacgacaaaccgtttaaaaccgtggcagaaggcgtggcggaa
tatatggcgtggttgaataaataa
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