Akkermansia glycaniphila: PYTT_1975
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Entry
PYTT_1975 CDS
T04551
Name
(GenBank) pria: primosomal protein n'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
agl
Akkermansia glycaniphila
Pathway
agl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
agl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PYTT_1975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agl03400
]
PYTT_1975
Enzymes [BR:
agl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PYTT_1975
DNA repair and recombination proteins [BR:
agl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PYTT_1975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
AAA_19
AAA_30
PIF1
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
SEH94679
UniProt:
A0A1C7PBS5
LinkDB
All DBs
Position
I:complement(2327863..2330124)
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AA seq
753 aa
AA seq
DB search
MQTPQQQNLFDEPAVRAARILIDGASDLVFDYAIPPGIEGILPGCRVEIPLRHHTATGTV
LEITEPQDTWAGSLKLIRRLIAPEPLISAPLMEMARWASQYYAAPIEQFIRCIVPEPVRQ
EKHSEKTHKVVRLLAKPSQEDETRLNKRAPRQASILHLLAESPDRTLTLKELGGTAALTP
CRALEKQGYLTITEEEQHRDPSAGEDYLPTSALKLNEEQEQALKAVVADIEHADKKPILL
QGVTGSGKTEVYLQAVEHTVRQGKSALILVPEISLTPQTLQRFKSRFSSLPGSVAILHSS
LSDGERFDEWHSIREGTARIAIGPRSAVFAPLRNLGLIIVDEEHDGSYKQESAPRYQGRD
LAVLRAKLEGATVVLGSATPSLETLHNARTGKYATLRLDRRADGQTLPLIRILDMRTEAK
DKKYAGVLSERLRMAIDKRLARGEQTILLLNRRGFARSLQCPDCGHNVTCAHCALPLTYH
ITEDRLICHLCGYRAIVPRECPECRSSNILLQGFGTQKVEAILNRAFPQARLQRIDADIS
RRKNAVRDILGQFRARKLDILLGTQMIAKGLDFPGVTLVGVLNADLGLCIPDLRASERTF
QLLTQVAGRAGRGDLDGEVIIQTFTPHAAAIQFARRHDTDGFADQELDLRRQFEHPPYVH
LAVLTLRSTKEELAEYSMHTLYRRLVKNLPPDILVSEPAPAPIPKAYGQYRFQSTIKSHS
ARRIATCVSQEIAAMNAGDDIIITLDIDAYSFM
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaccgcagcaacagaacctctttgacgaacctgccgtgcgggcggcccgcatc
ctcatcgacggcgcgtccgacctcgtcttcgactacgccatcccccccggcatcgaaggc
atcctccccggctgccgcgtcgaaatccccctccgccaccacaccgccacgggaaccgtc
ctcgaaatcaccgagccgcaggacacatgggcgggcagcctcaaactcatccgacgcctc
atcgctcccgagccgctcatctccgcccccctcatggaaatggcccggtgggcctcgcaa
tactacgccgcccccatcgaacaattcatccgctgcatcgtccccgaacccgtccggcag
gaaaaacacagcgaaaaaacccataaagtcgtccggctcctcgccaaaccctcgcaggaa
gacgaaacccggctcaacaaacgcgccccccggcaggcctccatcctccacctccttgcc
gaaagcccggaccgcacactcaccctcaaggaactcggcggcaccgcagccctcaccccc
tgccgtgcactcgaaaaacagggctacctcaccatcaccgaagaagaacaacaccgcgac
ccctccgccggagaagactacctgcccacctcggcactcaaactcaacgaagaacaggaa
caggccctcaaagccgtcgtggccgacatcgaacacgccgacaaaaaaccgatcctcctt
caaggagtcaccggatccggcaaaacggaagtctacctccaggccgtcgaacacaccgtc
cggcagggaaaatccgccctcatcctcgtcccggaaatctccctcaccccccaaaccctc
cagcgcttcaaatcccgattctcctccctgcccggctccgtcgccatcctccacagctcc
ctctcggacggcgaacgcttcgacgaatggcactccatccgcgaaggcacagcccgcatc
gccatcggcccccgctcagccgtcttcgcccccctgcgcaacctcggcctcatcatcgtc
gacgaagaacacgacggctcctacaaacaggaaagcgccccccgctaccagggccgggac
ctcgccgtcctccgcgccaaactcgaaggagccaccgtcgtcctcggctccgccaccccc
tccctcgaaaccctccacaacgcccgcaccggcaaatacgccaccctgcgcctcgaccgc
cgggcggacgggcaaaccctgcccctcatccgcatcctcgacatgcgcaccgaagccaag
gacaaaaaatacgcaggagtcctctccgaacgcctccgcatggccatcgacaaacgcctc
gcccggggagaacaaaccatcctcctcctcaaccgccgcggcttcgcacgctccctccag
tgcccggactgcggccacaacgtcacctgcgcccactgcgccctccccctcacctaccac
atcaccgaagaccgcctcatctgccacctctgcggctaccgcgccatcgtcccccgcgaa
tgccccgaatgccgttcctccaacatcctcctgcaaggcttcggcacccagaaagtagaa
gccatcctcaaccgagccttccctcaggcacgcctccaacgcatcgacgccgacatctcc
cgccggaaaaacgccgtccgcgacatcctcgggcaattccgcgcccgcaaactcgacatc
ctcctcggcacccaaatgatcgccaaaggactcgacttccccggagtcaccctcgtcgga
gtcctcaatgccgacctcggcctctgcatccccgacctccgcgcctccgaacgcaccttc
cagctcctcacgcaggtcgccggacgcgccggacgcggcgacctcgacggagaagtcatc
atccagactttcaccccgcacgccgccgccatccagttcgcccgccggcacgacaccgac
ggcttcgccgatcaggaactcgacctccgccgccagttcgaacaccctccctacgtccac
ctcgccgtcctcacactgcgatcgaccaaggaagaactggccgaatactccatgcacacc
ctctaccgcaggctcgtcaaaaaccttccgccggacatcctcgtcagcgaacccgctccc
gcccccatccccaaggcatacgggcaataccgcttccaaagcaccatcaaatcacactcg
gcgcgccgcatcgccacctgcgtctcgcaggaaatagcggccatgaacgcgggagacgac
atcatcatcaccctagatatcgacgcctactccttcatgtag
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