Agrobacterium tumefaciens H13-3: AGROH133_05449
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Entry
AGROH133_05449 CDS
T01432
Symbol
nikA
Name
(GenBank) nickel ABC transporter, periplasmic nickel-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
agr
Agrobacterium tumefaciens H13-3
Pathway
agr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AGROH133_05449 (nikA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
agr02000
]
AGROH133_05449 (nikA)
Transporters [BR:
agr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AGROH133_05449 (nikA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ADY64108
LinkDB
All DBs
Position
circular:1133031..1134524
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AA seq
497 aa
AA seq
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MIKHVLLATSAIVFSFSVQTAKADTITYDDYTGVKTGWQMASDDAYLGSRAGCFESMVRV
GYDTALEPGLAESWTQTSPKVWEFKLRKGVKFQNGEPLNAKAAVNALTNLLKAPVPARAF
SPKLVAAVEVGGDDIVKITTIEPSVLLPAQMASPATSILAPSAYKDGKVDPIGTCTGPFK
ITKVDASQYMELTANHDYWNGMPKLSGGRVNFIPDADTRATQIRSGEVQISRVIPPWAVK
TIVATKGVKVAPITVPRITEMLLNNSKPPFKDIKVRQAIRAAIDTAGIADSIYEGMVKPA
TMPFAPGEPWAPQNVTPAYDIEKAKALLKEAGIAPGSLKLTLLAYTERTELKDVAAVIQA
QLQEIGIKVDVRVADYTAIEPDLLSGNFDMVLLSRGYATDVAEPIGFLNADYTCGGGYNI
SHYCSEETDKLIKSAYMAAEPAKRYAIYAEAAKRIYDEAVTVYLVHETAFDAYSDKVENF
KPHPINYFIMTKDLAVK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcacgtacttttggcgacaagcgccattgtgttttcgttttcagttcaaacg
gccaaggccgatacgattacctatgacgattataccggcgtcaagaccggctggcagatg
gcttccgacgatgcctatctcggttcgcgcgcagggtgtttcgaaagcatggtccgcgtc
ggctatgacaccgcactggagccgggcttggccgaatcctggacacaaacctcaccgaag
gtttgggagttcaagttgcgcaagggcgtgaagttccagaacggcgagccgcttaatgca
aaagccgcggtcaatgcgctcaccaatcttctgaaagcgcccgttccggcccgggccttt
tcgcctaagctggtcgctgccgtcgaggttggtggcgacgatatcgtgaagatcacgacc
atcgagccatcggtgctgctgccggcgcaaatggcaagcccggcgacttcgatcctcgcg
ccatccgcctataaggacggcaaggtcgatccgatcggaacctgcaccggaccgttcaag
atcaccaaggtcgatgccagccaatatatggaactgacggcgaaccatgactattggaac
ggtatgccgaagctctcgggcggccgtgtgaactttattccggatgccgatacccgcgcc
acccagataagaagcggtgaagtgcagatttcgcgcgtgattccaccttgggcggtaaag
accattgtagccacgaagggtgtcaaggttgcgccaattaccgtgccccggattacggaa
atgctgctcaataattcgaagccgccgtttaaggacatcaaggttcggcaggcgatccgg
gccgccatcgacaccgccggtattgccgacagcatctatgaaggcatggtaaagcccgca
acgatgcccttcgcaccgggagagccgtgggcgccgcaaaacgtcacgcccgcttatgac
atagagaaggcaaaggctctgctgaaagaggcgggcattgcccccggcagcctgaagctg
acacttctggcctatactgaaagaaccgaactcaaggatgttgccgccgttattcaggcc
caattgcaggaaatcggcatcaaggtcgatgttcgcgttgctgattacactgcgatcgag
cccgatctcctgtccggcaatttcgacatggtccttctgtcacgcggttatgccaccgat
gttgcagaaccgatcgggttcctcaacgccgactatacctgcggaggcggctacaacatc
tcccattattgcagtgaggagacggacaagctgatcaaatcggcctatatggcggctgag
ccggccaaacgttacgccatctatgccgaggcggcgaagcggatttacgacgaagccgtc
accgtctacctcgtccatgagaccgctttcgatgcctattcggacaaggtcgaaaacttc
aagccgcatccgatcaactactttatcatgaccaaggatctggcagtgaaatag
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