Aeromonas hydrophila subsp. hydrophila ATCC 7966: AHA_2448
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Entry
AHA_2448 CDS
T00424
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
aha
Aeromonas hydrophila subsp. hydrophila ATCC 7966
Pathway
aha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AHA_2448 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aha03400
]
AHA_2448 (uvrB)
DNA repair and recombination proteins [BR:
aha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AHA_2448 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AHA_2448 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
DUF87
Microtub_bd
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABK39417
UniProt:
A0KL12
LinkDB
All DBs
Position
complement(2700719..2702731)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFQLASQFQPAGDQPRAIAQLLDGIESGLAHQTLLGVTGSGKTFTMANVIATLNRPT
MILAPNKTLAAQLYGEMKEFFPDNSVEYFVSYYDYYQPEAYVPTTDTFIEKDASINDHIE
QMRLSATKALLERRDVVIVASVSAIYGLGDPQAYLSMMLHLKVGDLINQRDILRRLAELQ
YTRNDMAFQRGTFRVRGEVIDIYPAESDKLALRVELFDEEVERLSLFDPLTGAIEQTVVR
YTIYPKTHYATPRETILGAIEHIKEELKSRREQLLSLGKLVEEQRISQRTQFDIEMMQEL
GYCSGIENYSRYLSGRAPGEPPPTLFDYLPGDGLLIIDESHVTVPQIGAMFKGDRSRKET
LVEYGFRLPSALDNRPLKFDEFEALMPQTVFVSATPGPYELEKSGGDVVQQVVRPTGLLD
PEIEVRPVTTQVDDLLSEIRKRVAVEERVLVTTLTKRMAEDLTEYLADHEVRVRYLHSDI
DTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTRSLIQTIG
RAARNLNGKVILYGDTITNSMQVAIEETERRRALQHAHNLEHGITPTGLNKSVGDVMDMG
GSRSAGKSGRGSRKAAEPQGEYHARSASEISKEIKRMEEQMFQHARDLEFEQAAALRDQI
QRLRNELIES
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttattccagctggccagccagtttcaacccgccggggatcagccaagggcc
atcgcccagctgctcgatggcatcgaatccggccttgcccatcagaccctgctcggggtg
accggctcgggcaagaccttcaccatggccaacgtcatcgccaccctcaatcgccctacc
atgatcctggctcccaacaagaccctggcggcccagctctatggcgagatgaaggagttc
ttccccgacaactcggtggagtatttcgtctcctactacgactactaccagccggaagcc
tatgtgccgaccaccgacaccttcatcgagaaggatgcctccatcaacgatcacatcgag
cagatgcggctgtcggccaccaaggcactgctggagcgccgtgacgtggtgatcgtcgcc
tcggtgtcggccatctacggtctgggagacccgcaagcctacctcagcatgatgctgcac
ctgaaagtgggggacctgatcaatcagcgggatatcctgcgccgcctcgccgagctgcag
tacacccgcaacgacatggccttccagcgcggcaccttccgggtgcggggggaggtgatc
gacatctaccctgccgaatcggacaagctggccctgcgggtggagctgtttgatgaagag
gtggagcgcctctccctgttcgatccgctgaccggtgccatcgagcagacggtggtgcgc
tacaccatctaccccaagactcactacgccaccccgcgcgagaccattttgggggccatc
gagcacatcaaggaggagctcaagagccgccgtgagcagctgttgtcgctgggcaagctg
gtggaggagcagcgcatcagccagcgtacccagttcgacatcgagatgatgcaggagctg
ggctactgctccggcatcgagaactacagccgttacctctccggccgtgcccccggcgag
ccgccacccaccctgtttgactatctgccgggggacggcctgctcatcatcgacgaatcc
cacgtcacggtgccgcagatcggcgccatgttcaaaggggacagatcccgcaaggagacc
ctggtggagtacggcttccggctcccctcggcgctcgacaaccggccgctcaagttcgac
gagttcgaggcgcttatgccgcagacggtgtttgtttcggccacccccggcccctacgag
ctggagaaatccggcggcgatgtggtgcagcaggtggtgcgccccaccggcctgctcgac
cccgagatcgaggtgcgtccggtcactacccaggtggacgacctgctctccgagatccgc
aaacgggtggcggtggaggagcgggtgttggtcaccaccctcaccaagcggatggcggag
gatctgaccgaatacctggcggatcacgaggtgcgggtgcgttatctgcactcggacatc
gacaccgtcgagcgggtggagatcattcgggacctgcgcctcggcaagttcgacgtgctg
gtggggatcaacctgctgcgggaggggctcgatatgccggaggtctcgctggtggccatc
ctggatgcagataaagagggtttcctgcgctccacccgctccctcatccagaccatcggc
cgggcggcgcgcaacctcaacggcaaggtcattctctacggggataccatcaccaactcc
atgcaggtggcgatcgaagagaccgagcggcgccgtgccctacaacatgcccacaacctc
gaacacggcatcaccccgacggggctcaacaagtcggtgggcgatgtgatggacatgggg
ggcagtcgcagtgcgggcaagagcgggcggggcagtcgcaaggccgccgagccacaaggg
gagtaccatgctcgttccgccagcgagatcagcaaggagatcaagcggatggaagagcag
atgttccagcatgcacgggatctggagttcgagcaggcggcagcgctgcgggaccagatc
cagcggctgcgcaacgagttgatcgagagttga
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integrated database retrieval system
