Atlantibacter hermannii: NCTC12129_00934
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Entry
NCTC12129_00934 CDS
T05790
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ahn
Atlantibacter hermannii
Pathway
ahn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ahn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC12129_00934 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ahn03019
]
NCTC12129_00934 (pcnB)
Enzymes [BR:
ahn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC12129_00934 (pcnB)
Messenger RNA biogenesis [BR:
ahn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12129_00934 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
VDZ71861
UniProt:
A0A447LJC2
LinkDB
All DBs
Position
1:complement(853034..854398)
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AA seq
454 aa
AA seq
DB search
MLNREESEVDETVSQPTITVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPDQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEENV
NDRAISQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGLQDLKLGI
IRLIGDPETRYREDPVRMLRAVRFAARLDMKISPETGEPIPRLATLLNDVPPARLFEESL
KLLQMGYGYNTYLLLREYSLFQPLFPTITRFFTEQGDSPMERIIEQVLKNTDNRIHNDMR
VNPAFLFAAMFWYPQIETAQKIAQESGLSWNDAFALAMNDVLDEACRSLAIPKRITALIR
DIWQLQLRLSRRQGKRAWKLMEHPKFRAAYDLLALRAEAENNAELQRLARWWGEFQVSAP
PAQKDMLNDLDDEPAGRRRPRRPRRRAPRREGNA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatcgcgaggaaagcgaggttgacgagaccgtcagccagcccacgatcaccgtc
atcccacgcgagcagcacgctatttcccgcaaagatatcagtgaaaacgccctcaaggtg
atgtaccgcctgaataaagctggctacgaagcctggctggttggcggcggcgtacgcgat
ctgttgctgggcaaaaaaccaaaagattttgacgtgacgaccaatgccacgccggatcag
gtccgtaaactgttccgcaactgccgtctggttggccgtcgctttcgcctggcccacgtt
atgttcggcccggaaattatcgaagtcgcgacctttcgcgggcatcacgaagaaaatgta
aacgatcgcgccatttcccaacgcggccagaatggcatgctgctgcgcgacaacattttc
ggctccattgaagaagatgcccagcgccgtgacttcaccatcaacagcctgtactacagc
gtggcggatttcaccgtacgcgattacgtgggcggtctgcaggatttaaaactcggcatc
atccgcctgattggcgatccggaaacccgctaccgtgaagatccggtgcggatgctgcgc
gcagtacgtttcgcggcgcgcctggatatgaagatcagcccggaaaccggcgaaccgatc
ccgcgcctggcgacgctgctcaatgatgtgccgcccgcccgcctgttcgaagagtcatta
aagctgttgcagatgggctacggttacaacacctatttgctgctgcgcgaatattcgctg
ttccagccgttgttccctaccatcacccgctttttcaccgagcagggtgacagcccgatg
gagcgcatcatcgagcaggtgttgaaaaacaccgataaccgcattcataacgatatgcgc
gtaaacccggcgttcctgtttgccgccatgttctggtatccgcaaatcgaaactgcgcaa
aaaatcgcgcaggaaagcggcctgagctggaacgacgcgtttgcccttgcaatgaatgat
gtgcttgatgaagcctgccgttcgctggcgatcccgaaacgcattaccgcgctgatccgc
gatatctggcagcttcagctgcggctttcgcgccgtcagggcaagcgcgcctggaagctg
atggagcatccgaaattccgcgccgcttacgatctgctggcgctgcgcgctgaagcggaa
aacaatgccgagcttcagcgcctggcgcgctggtggggcgagtttcaggtttccgcgccg
cctgcgcaaaaagacatgcttaacgatctggatgatgaacctgccggacgccgtcgtccg
cgtcggccgcgccgtcgtgcgccgcgccgcgagggtaacgcgtga
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