Antarctobacter heliothermus: ANTHELSMS3_02879
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Entry
ANTHELSMS3_02879 CDS
T04983
Symbol
rafR
Name
(GenBank) HTH-type transcriptional regulator RafR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
aht
Antarctobacter heliothermus
Brite
KEGG Orthology (KO) [BR:
aht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aht03000
]
ANTHELSMS3_02879 (rafR)
Transcription factors [BR:
aht03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ANTHELSMS3_02879 (rafR)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
HTH_5
HTH_3
HTH_IclR
HTH_24
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ASP21533
UniProt:
A0A222E5R1
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Position
complement(2965466..2966488)
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AA seq
340 aa
AA seq
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MNLKQLSQHLNLSQTTVSRALNGFPEVSEKTRERVLQAAKSLNYSPNSRAKGLATGRAHA
IGHVLPISDQHEMVNPIFGDFIAGAGQTYAKEGYEVVISLVRDTEQEQAYRSIRSRGNVD
GIIVHGPRMADDRIPLLSELGLPFVVHGRASDVTLPYSWLDTNNSRAFRRATDFLLDLGH
RRIALINGLEFMDFAFRRRESYVSALTDRGIAADPTLMRSDEMTEVFGYRSARDMLRDSA
PPTAFLVSSMITAIGVRRAIHEAGLQMGRDVSVITHDDDLGYLKNGHDVPIFTATRSSVR
SAGAKAAEMLLHLIRNPGSPHLTQLMEAELIIGSSTGPAQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcaagcaactctcacaacacctcaacctgtcccagaccaccgtcagccgcgcg
ctgaacggctttcccgaggtcagcgaaaagacccgggaacgggtgttgcaggcggcaaaa
tcgctgaactacagcccgaactcccgggccaagggactggccaccgggcgcgcgcatgcg
attggccatgtgctgccgatcagcgaccagcatgagatggtgaacccgatcttcggcgat
tttattgccggagcgggtcaaacctacgccaaggagggctatgaggttgtcatcagccta
gtccgcgacacggagcaagagcaggcttaccgctctatccgcagtcgcggcaatgtcgac
ggaatcatcgtgcacgggccgcgtatggccgacgaccgaatcccgctgttgagcgagttg
ggcctgccctttgtcgtacatggccgcgcatccgatgtgaccctgccctactcttggctg
gacaccaacaacagtcgcgcgttccggcgggccactgatttcctactggaccttggccat
cgccgcatcgcgctgatcaatgggctggagttcatggacttcgcctttcgtcgccgcgaa
tcctatgtcagtgccctgaccgaccgtggcatcgccgccgacccgacgttgatgcggtct
gacgaaatgactgaagtcttcggctatcgcagcgcccgcgacatgctgcgcgattctgcc
cccccgaccgcctttctggtgtcctcgatgatcaccgccattggagtgcgccgcgccatc
cacgaggccgggttgcagatgggtcgcgacgtctccgtgatcacccatgacgacgatctt
ggctatctcaagaacggccacgacgtaccgatctttaccgccacacggtcctctgtccgc
agcgccggagccaaggcggcggaaatgctgctgcacctgatccgcaatcccggctccccg
cacctgacacagctgatggaagccgaactgattatcggcagttccaccggccccgcgcaa
taa
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