Pseudalgibacter alginicilyticus: APS56_04990
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Entry
APS56_04990 CDS
T04100
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ahz
Pseudalgibacter alginicilyticus
Brite
KEGG Orthology (KO) [BR:
ahz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ahz03016
]
APS56_04990
Enzymes [BR:
ahz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
APS56_04990
Transfer RNA biogenesis [BR:
ahz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APS56_04990
Prokaryotic type
APS56_04990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
tRNA_bind_4
GlcV_C_terminal
Motif
Other DBs
NCBI-ProteinID:
ALJ04535
UniProt:
A0A0P0CNX6
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All DBs
Position
complement(1218110..1218853)
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AA seq
247 aa
AA seq
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MRYFIELSYNGSAYHGWQFQPNAITVQEVIEKSLSVLLKEKTPIMGAGRTDAGVHASQMF
AHFDTHVVFDEAEITYKLNLYLPKDVAIHTIFKVKDKAHARFNALSRTYLYRVSLKKNVF
TFDGAYYIKQDLDIEAMKKATKILFEYKDFQCFSKVKTDVKTYNCTIMKAEWSFKNDELQ
FVIQADRFLRNMVRAIVGTMIHIGQRKIKIDDLHTIIQSKNRSEAGFSVPAHALYLTEVA
YPNDIKL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgcgatattttatagaactctcttataatggtagtgcttaccacggttggcagttccag
ccaaatgccataaccgtacaggaagttatagaaaaatcgttatctgtgcttttaaaggaa
aaaacacccataatgggagccggtagaacggatgcaggagtacatgcttcgcaaatgttt
gcacactttgatacccatgttgtttttgatgaagctgaaatcacctataagctaaattta
tatttacctaaggatgtggctattcacactatttttaaggtaaaagataaagcccatgca
cgttttaatgcattaagtagaacatatctatatcgtgtaagtttaaagaaaaatgttttt
acatttgacggtgcttattatattaaacaagatttggatatagaagcgatgaaaaaggct
actaaaattctatttgaatataaagattttcaatgcttttctaaagttaaaaccgatgta
aaaacatacaattgtacaattatgaaagcggagtggagttttaaaaatgacgaacttcag
tttgtaatacaagccgataggtttttacgaaatatggtgcgagctattgtaggaaccatg
attcatattgggcaaagaaaaattaagattgatgatttacacactataatacagtctaaa
aataggagtgaagctgggttttcggtaccagcacatgctttgtatttaactgaagttgct
tacccaaatgatataaaattgtag
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