Amycolatopsis japonica: AJAP_30100 Help Entry AJAP_30100        CDS       T03225                                  Name (GenBank) Hypothetical protein   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism aja  Amycolatopsis japonica Pathway aja03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:aja00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AJAP_30100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:aja03400]     AJAP_30100 Enzymes [BR:aja01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AJAP_30100 DNA repair and recombination proteins [BR:aja03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AJAP_30100 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol Motif Other DBs NCBI-ProteinID:  AIG78849 UniProt:  A0A075V2P1 LinkDB All DBs Position complement(6409222..6410139) Genome browser AA seq 305 aa AA seqDB search MPEERITVEVEGRRLGLSNLDKVLYPAHGFTKREVLDYYRRIAPVMLPHLRDRAATFRRF PDGVDGEPFYEKNVSRHAPDWVRTARLTNRGRRGGEETLDYPVVGDLPTLMWAANLAALE LHIPQWTVGPRGARKSPDLLVFDLDPGPPADVVDCCRVAETLSDLLIGDGLTVYAKTSGN KGMQLYCPVRTRSGERTSEYAKAVAEELARRSPETIVAKMTKAIRPGRVFIDWSQNNTAK TTIAPYSLRGRAVPTVSTPVTWEEVEACRKAADLLFTAEQVLERVEEMGDLFGDIAEHRA AVPQR NT seq 918 nt NT seq  +upstreamnt  +downstreamnt gtgcctgaggagcggataacggtcgaggtcgagggtcggcggctggggctgtccaatctg gacaaggtgctctatcccgcgcacggtttcaccaaacgcgaggtcctcgactactaccgc cggatagccccggtgatgctcccgcatctgcgcgaccgcgccgccaccttccgccggttc cccgacggtgtcgacggcgaaccgttctacgagaagaacgtttcccgtcacgcgcccgac tgggtgcgcaccgcgcggctcaccaaccgcggccgccggggcggggaggagacgctcgac tacccggtcgtcggcgacctcccgacgctgatgtgggcggccaatctcgccgcgctggaa ctgcacattccacagtggaccgtcggcccgcgcggcgcccggaaatcacccgatctgctg gtgttcgacctcgatcccgggccgcccgcggacgtcgtcgactgctgccgggtggccgag acgctcagcgacctgctcatcggagacggtctcacggtgtacgcgaagaccagcggcaac aagggaatgcagttgtactgcccggtgcgcacgcgctccggcgaacgcacctccgagtac gccaaggccgtcgcggaggagctcgcgcgccggtcaccggagaccatcgtcgccaagatg acgaaggccatccgccctggccgcgtgttcatcgactggagccagaacaacaccgccaag accaccatcgcgccgtactcattgcgcggccgcgccgtcccgaccgtctccacgccggtg acctgggaggaggtcgaagcctgccgcaaggccgccgacctgctgttcaccgccgagcag gtgctcgaacgcgtcgaggagatgggtgacctgttcggcgacatcgccgagcatcgcgcg gccgtgccccaacggtga

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