Histoplasma mississippiense: HCAG_00496
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Entry
HCAG_00496 CDS
T02229
Name
(RefSeq) similar to DNA repair helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aje
Histoplasma mississippiense
Pathway
aje03022
Basal transcription factors
aje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aje00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HCAG_00496
09124 Replication and repair
03420 Nucleotide excision repair
HCAG_00496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aje03021
]
HCAG_00496
03400 DNA repair and recombination proteins [BR:
aje03400
]
HCAG_00496
Enzymes [BR:
aje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCAG_00496
Transcription machinery [BR:
aje03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HCAG_00496
DNA repair and recombination proteins [BR:
aje03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HCAG_00496
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
5450388
NCBI-ProteinID:
XP_001543450
LinkDB
All DBs
AA seq
750 aa
AA seq
DB search
MPPKRKAAGSMLIPSFLGSALTVADRLWLKQVVEKFSLQAFSQKKKADIQRQDPHFGYKD
FSSLPLKPDHANRPLWIEPLKGTITLESFSPLAPQAQDFLTTIAEPLSRPTHLHEYRLTG
NSLYAAVSVGLLPGDIINFLDRLSKTPLPETIKSFIVNFTKSYGKIKVVLKYNRFFVESS
DPATLQMLLQDEVIGPQRLQNSEAQVHSFEIPNTAVESVKARCQSMGCPALEEYDFRNDE
INPTLDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAACTIKKGT
IILCTSSMSVVQWRNEFLRWSNIDPSDIAVFTSDNKEKFRRNTGIIVSTYSMVSQTRARS
HDAEKMMDWMQSREWGLMILDEVHVVPASMFRKVTSAIATQTKLGLTATLLREDDKIKDL
NFLIGPKLYEANWMELAEQGHIAKVQCAEVWCPMTTEFYTEYMREKSRKAALLYIMNPRK
FQACQFLIDYHEKRGDKVIVFSDNVYALERYALKLNKAYIYGGTPQNERLRILENFQHNE
QVNTIFLSKIGDTSLDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYS
LVSKDTDEMFYSSKRQAFLVDQGYAFKVITHLEGIENLEGLAYATPTERRELLQEVMLQN
ETSAAVEEVVDDLFSERSGGPKARGAAKKVAVKRSAATLSGLAGGEDMAYIEYNKSRNKQ
LKEKVGHHPLFKKIERDRLKRKKALGLDKK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaaaggaaggcagctggcagtatgcttatcccttcttttctagggtctgct
ttaactgtcgctgaccggctatggctgaaacaggttgtcgagaaattttctcttcaggcc
tttagtcaaaagaagaaagcggacatccaacgacaggatccacatttcggctataaagac
ttctcatccttgcctttgaagcccgaccacgctaaccgaccgctatggatcgagccgttg
aagggcaccatcacgctggaaagcttctcacctctagcgccccaggcacaagatttcctt
acgacgatagctgagcctctgtcaagacctacgcatttgcacgagtatcgattaacggga
aacagtctttatgctgcggtctcagtgggcttactaccgggagatatcattaacttcctg
gatcgtttgtccaaaacgccgctaccggaaacaatcaagtctttcattgtcaatttcacc
aagtcgtatggaaagataaaagttgttttgaaatacaatagattctttgtggagagctcg
gatcctgccactctgcagatgttgcttcaagatgaagttattgggccgcagagattgcaa
aactcggaggcacaagtccacagttttgagatcccaaacacggccgtggaatctgttaag
gctcgatgccaaagtatgggctgtccagctcttgaagaatatgactttagaaacgatgaa
atcaaccctactctagatatcgacctgaagcccaatgcgcaaatccgcagttaccaagag
aaaagtttgagtaaaatgtttggaaacggacgagccaagagtggaatcatcgtcctgcct
tgcggtgcagggaaaaccttagttggcataacagccgcctgtaccatcaagaaaggaacc
attatcctttgcactagctcgatgtccgttgttcagtggaggaacgaatttcttcggtgg
tctaatattgatcctagtgatattgccgttttcacttctgacaacaaggaaaaattccgg
agaaatactggaattatagtctccacatattccatggtatctcaaacacgggctcgttcc
cacgatgcggagaaaatgatggattggatgcaatctcgggaatggggcttgatgatcttg
gacgaggtccacgtcgttcccgcgtcgatgttccggaaggtcacttcggccattgcgact
cagaccaaacttgggctcacagcgactcttcttcgtgaggatgataagatcaaggatttg
aattttttgatcggccccaagttgtatgaagccaactggatggagttggctgaacagggc
cacatcgccaaagtccagtgtgctgaggtgtggtgccccatgacaacggaattttatacc
gagtacatgcgcgagaaatctagaaaagcagcgttactctatatcatgaatccgaggaag
ttccaggcgtgtcagtttttgattgattaccacgaaaagcgtggagacaaagtcattgtt
ttctctgacaatgtttacgctctcgaacgatatgccctgaaattgaacaaggcctacatc
tacggcggaacgcctcaaaacgaacgattgcgaattctagagaacttccagcacaatgaa
caagtcaatacaatcttcctgtccaagattggtgatacctcgctagatctgcctgaagcg
acttgcttgatacagatctcgtcacattacggctctcgtcgtcaggaagcgcaacgtctc
ggacgtatcctacgtgccaaacgaaggaatgatgagggattcaacgctttcttctactcc
cttgtatcgaaagataccgacgagatgttttactcttccaaacgtcaagctttcttagtt
gaccagggatacgcgtttaaggtgatcacgcaccttgaaggaattgagaaccttgaagga
ctcgcatacgcaactccgacggagcgtcgagaacttctgcaagaagtcatgctgcagaac
gaaacctccgcagctgtagaagaagtagtggacgatcttttcagcgaacgctcaggggga
ccgaaagcgcgaggtgcggccaagaaagttgcagtgaaacgtagtgcggcgactttgagc
ggccttgccggcggtgaggacatggcgtatatcgaatataataaaagtaggaataaacag
ttgaaggagaaggtgggacatcacccgctattcaagaaaattgagcgcgaccgactgaag
agaaaaaaagctcttggcctcgataaaaagtag
DBGET
integrated database retrieval system