Amphritea japonica: AMJAP_1899
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Entry
AMJAP_1899 CDS
T06992
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ajp
Amphritea japonica
Pathway
ajp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ajp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMJAP_1899 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ajp03400
]
AMJAP_1899 (recD)
Enzymes [BR:
ajp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AMJAP_1899 (recD)
DNA repair and recombination proteins [BR:
ajp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMJAP_1899 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
SH3_13
Viral_helicase1
AAA_11
Helicase_RecD
AAA_22
UvrD-helicase
UvrD_C
SLFN-g3_helicase
nSTAND3
AAA_28
AAA_16
T2SSE
HerA_C
CbiA
Motif
Other DBs
NCBI-ProteinID:
BBB26490
UniProt:
A0A7R6STB2
LinkDB
All DBs
Position
complement(2127646..2129565)
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AA seq
639 aa
AA seq
DB search
MQLLQQLRQQQLIRPLDTQFARFIRDEELSISGQAEVNDALPLLAALVSLQLGRGEVCLP
LNGWGVLMENWPSVLRKPAEQLLQGLCENTLIGFSVITDGAQEAPLVLSSGRLYLYRYWL
YETDVAARIQQLAAPIPLNRDSIKAGLRRLFIDRLAGEIDWQQIAVAIAISRRFSVISGG
PGTGKTTTVARLLALYAESFSQQMQRAPLIKLAAPTGKAAARLSESLAGAREGLPVSDAI
CAMIPNQAVTLHRLLGPRPDSKNFRHNAENPLHLDLLVVDEASMIDLPMIYRLLSALPPH
AQLIMIGDRDQLASVEAGSVLGDICSWDNQAGVSVQASDSEVSTGLCYRPAQLEYLQEVC
ELPAPVSAPGSSSISDALALLRRSYRFDESSGIGYLARAVNRGDGLQAMQLFDQPWEDIR
FMALSDEGYEEMVSEVCAGYAVYLKQLQQRSEPRLLLKAFNQIQLLAVVRQGIYGVDGLN
QAVEEHLQRQRLISLTGDWYIGRPVMIIRNDYQLGLFNGDIGITVADEDGRLRVWFELSD
GEMKGVLPGRLPEHETVYAMTVHKSQGSEFDQVVMILPAEDTPLLTRELIYTGITRAKSK
FALQATPQAFIKGSHRRTERASGLSWRLWQATGASATEI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgctgcaacagttacgtcaacagcaattgattcgtccgctggatacgcaattt
gcccgttttatcagggacgaggagttgtcgattagcgggcaggctgaagtgaacgatgct
ttaccgctattggctgcgctggtgagcctgcagttggggcgaggggaagtctgtctgccg
ctcaatggttggggggtgttgatggaaaactggccctcagtcttgcgtaagccagcagaa
caactgttgcaggggctatgcgagaatactttaatcggcttttctgttatcacggatggc
gcacaggaagcaccattggtgctgagcagtgggcggctctatctctatcgatactggctt
tacgaaaccgacgttgcggccagaattcaacaattagcggccccgattccgctgaatcgg
gatagtatcaaagcgggattaagacgactatttattgatcggttagccggtgaaatagat
tggcaacagatcgctgttgcgatagcgattagtcgtcgctttagtgtcattagcggcggt
ccgggaactggtaagaccaccactgttgcgcgtttgctggcgctctatgccgaatcattc
agtcagcagatgcagcgtgcgcctctgattaagttagcggccccgactggaaaggctgca
gcccggttgagtgaatccctggctggtgcccgggaagggcttccggttagcgatgctatt
tgtgccatgatccctaaccaggcggtgacgctgcatcggttgctgggaccgcgtcctgat
agtaaaaactttcggcataatgccgagaatccattgcatttggatctgctggtggtcgat
gaagcgtcaatgatcgacttgccaatgatttatcgtttgttgtcggcactacctccgcac
gcgcaattgatcatgattggcgatcgggatcagctggcctccgttgaggcgggcagtgta
ttgggtgatatctgttcctgggataatcaggcaggagtgtcagttcaggcttcagactca
gaagtgtcaacagggttgtgctacaggcctgcacaactggagtatttacaggaagtgtgt
gaactgccagcgccggtatctgcgccggggagtagctctatttcagatgctttggcgttg
ctgcgacgaagctaccgttttgatgaaagcagcggtataggctatctggccagagcggtg
aacaggggagatggtctgcaggcaatgcaattgtttgatcagccctgggaagatattcgc
tttatggcgttgtcagacgaaggctatgaagagatggtgtcagaagtgtgcgctggttac
gctgtctatttaaagcagctacagcagcgctctgagccccggcttttattgaaagccttt
aatcagatccagctattggcggtggtcaggcaggggatctacggtgttgacgggctgaat
caggccgttgaagagcatttgcaacgacagcgactgatcagtctgacaggcgactggtat
ataggccggccggttatgattatccgtaatgactaccagttaggcttatttaacggggat
atcggtattacggttgcggatgaagatgggcgcttgcgggtctggttcgaattatcagat
ggggagatgaaaggggtgttgcccggccgcctgcctgagcatgagactgtgtacgctatg
acagtgcacaagagtcagggatcagagtttgatcaggtagtgatgatattgccagcagag
gatacgccactgctaacccgtgagctgatctataccggtattacccgggcgaaatcaaaa
ttcgcgttgcaggcaacgccgcaggcatttatcaaaggtagtcaccgacgcacagagcgc
gccagcggattaagctggcgtttgtggcaggcgaccggggcatctgcaactgaaatctaa
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