Arthrobacter jinronghuae: N2K98_01910
Help
Entry
N2K98_01910 CDS
T09565
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ajr
Arthrobacter jinronghuae
Pathway
ajr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ajr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N2K98_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ajr03019
]
N2K98_01910
03400 DNA repair and recombination proteins [BR:
ajr03400
]
N2K98_01910
Enzymes [BR:
ajr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N2K98_01910
Messenger RNA biogenesis [BR:
ajr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N2K98_01910
DNA repair and recombination proteins [BR:
ajr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N2K98_01910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
zf-TFIIB
Motif
Other DBs
NCBI-ProteinID:
UWX78999
LinkDB
All DBs
Position
387049..389214
Genome browser
AA seq
721 aa
AA seq
DB search
MESTDTQGTVSGTVSEASETTRPLHGEAVELLRALVGNDSAEFHQDQFEAIEALVAGGRR
ALVVQRTGWGKSAVYFVASLLLRARGAGPTLIVSPLLALMRDQVAAAARAGVRAVAINSA
NQLEWQDISAKLEADEVDVLLVSPERLNNPGFREQHLPELIRRSGLLVIDEAHCISDWGH
DFRPDYRRIRHLIERLPSTVPVLATTATANSRVVKDIEEQLAAGGEDVFTIRGPLARKSL
RLGVLRLPNPKARLAWLLTHLDDLPGSGIIYALTVSGAEDTARLLQKAGHPVLAYTGRTD
PADREEAEAALKENRVKALVATSALGMGFDKPDLGFVIHLGAPSSPVAYYQQVGRAGRGT
PNADVLLLPGAEDRDIWQYFATSSMPEEGPATAVLAELASGEVLSVGVLETRVNLKRSPL
ELLLKVLSVDGAVEKVSGGWRGTGQPWHYDRERYERIAAARVKEQQAMLDYESTTGCRMQ
FLSQQLDDPAAAPCGRCDNCAGRWFGDDVAAEATDNAAQALDKVGVEVDPRGMYPSGMDR
LGVPVKGKIKPDRTVFDGRALARLTDLGWGGRLREIFAPGAQDMPVDPALLQGCVQVLAQ
WGWAERPVAIVSIPSRSRPQLVDSLARGLSELGRIPYLGALQLPHGGPTGGPGGNSAFRL
ASVWDQFAVPPEGAAWFAANPGPVLLVDDFADSRWTLTEAGRVLREAGAQAVLPFVLALK
A
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcactgatacgcaaggcactgtttctgggactgtttcggaggcttctgaaacg
acccgtccgctgcacggcgaggcggtggagctgctgcgggccctggtgggcaatgactcc
gcggagttccaccaggaccagttcgaagccatcgaggcgttggtggccggcggacggcgc
gccctggtggtccagcgcaccggctggggcaagtccgcggtgtacttcgtcgccagcctg
ctgctgcgggcacggggggcaggtcccacgctgattgtttccccgctgctggcgctgatg
cgggaccaggtggccgccgccgcgcgggccggggtgcgggccgtggccatcaactccgcc
aaccagctggagtggcaggacatttccgcaaagctcgaggccgacgaggtggatgtgctg
ctggtttccccggaacggttgaacaatcccgggttccgcgaacagcacctgcccgagctg
atccggcgttccggactgctggtgatcgacgaagcgcactgcatctccgactggggccac
gacttccgtccggactaccgccgcatccgccacctgatcgagcggctgccctccacggtt
cctgtactggccaccactgccacggccaacagccgcgtggtgaaggacattgaggaacag
ctggccgccggcggcgaagacgtcttcaccatccgcggcccgctggcccgcaagtccctg
cggctcggtgtcctgcggctgcccaaccccaaggcgcgcctggcctggctgctgacgcac
ctggacgacctgcccggcagcggcatcatctacgccctgaccgtctccggcgccgaagac
accgcccggctgctccagaaggccggacatccggttctcgcctacaccgggcgcaccgac
cccgcggaccgggaagaggccgaagccgccctgaaggagaatcgggtcaaggcgctggtg
gccaccagcgcactgggcatgggcttcgacaaacctgatctgggcttcgtgatccacctg
ggtgcgccgtcttcaccggtggcctactaccagcaggtgggacgtgccggccgcggcact
ccgaacgccgatgtgctgctgctgccgggcgcggaggaccgtgacatctggcagtacttc
gccacgtcctccatgccggaggaaggaccggccaccgcggtgctcgccgagctggcttcc
ggcgaagtcctgtccgtcggtgtcctggagacccgggtcaacctgaagcgctcgccgctg
gaactgctgctgaaggtcctgtccgtggacggcgcagtcgagaaggtgtccggcggctgg
cggggcaccgggcagccgtggcattacgaccgggaacgctatgaacggattgccgctgcc
cgggtgaaggaacagcaggccatgctcgattacgagagcaccaccggctgccgcatgcag
ttcctgtcccagcagctcgacgatccggcggccgcaccctgcgggcgctgcgacaactgt
gccggccgctggttcggcgacgacgtcgcggccgaggccaccgacaacgcggcgcaggcg
ctggacaaggttggcgtggaggtggatccgcgtggaatgtatccctcgggcatggaccgg
ctgggtgtgccggtcaagggcaagatcaagccggaccggaccgttttcgacgggcgtgcc
ctggcccggctgaccgatctgggctggggcggacggctgcgtgaaatctttgctccgggc
gctcaagacatgcccgtggacccggcgctgcttcaaggttgcgtacaggtcctggcccag
tggggctgggccgaacgcccggtcgccattgtctccattccgtcccggtcccggccccag
ctggtggattcgctggcccgcggcctctcggaactgggccggattccctatctgggggcg
ctgcagctgccgcacggcggtcccacgggcggccccggcggcaacagtgccttccggctg
gcctccgtctgggaccagtttgcggttcccccggaaggggctgcctggttcgcggcgaac
cccggaccggtgctgctggtggatgatttcgccgacagccgctggacgcttacggaagcc
gggcgggtgctgcgggaagccggcgcccaggcggtgctgccgttcgtgctcgcgctgaag
gcctag
DBGET
integrated database retrieval system
