Acinonyx jubatus (cheetah): 106967193
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Entry
106967193 CDS
T04657
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
aju
Acinonyx jubatus (cheetah)
Pathway
aju04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aju00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
106967193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aju00536
]
106967193
Glycosaminoglycan binding proteins [BR:
aju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106967193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
106967193
NCBI-ProteinID:
XP_053063033
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Position
D2:29829714..29909277
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AA seq
575 aa
AA seq
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MSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGHPGPKGEMGLTGPRGQPGPQGQKGEKGQ
CGEYPHRLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGPPGLPG
PMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGITVSGMKGEPGTPGA
KGEKGAAGSPGLLSLLGQKGEKGDAGNSFGGGRGEPGPPGLPGPPGPKGEAGVDGQAGPP
GRQGDKGEPGAAGEQGPAGPKGSKGEPGKEMVDYNGNINEALQEIRTLALMGPPGLPGQI
GPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKAGPTGMKGEDGHV
GSPGEKGEKGETGQAGPPGLDGPTGEKGEPGGQGRPGTTGLPGPIGLPGFTGEKGEPGEK
GDPGVEVPGPPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASG
LDGRPGPPGTPGPVGVPGPAGPKGERGSKGDLGMTGPSGAAGLPGLHGPPGDKGNRGHRG
FKGEKGEPGLPGLDGLDAPCPLGEDGLPVQGCWNK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcattggtccccgcggcccccctggtcagccgggcactcgaggttttcctgga
tttccgggtcccatcgggctagatggaaaaccgggccaccccggacccaaaggagagatg
ggcctgacgggtccccgaggacagccgggacctcaaggacaaaaaggagaaaagggtcag
tgtggagagtacccacatcggctgctgcctctcctcaattcagtgcgactggctccaccc
ccagtcataaaaaggcggaccttccagggcgaacagggccaggccggtatccaaggacca
ccggggccaccaggcccccctggaccgagcggacctctggggcccccgggactgccaggg
cccatggggccccccggcttacctgggcctccaggaccaaagggagacccaggaatccag
ggttaccacggccgaaagggagaacgaggcatgccggggatgccgggcaaacacggagcc
aagggggctcccggaatcaccgtgtcggggatgaagggtgagccggggaccccaggagcc
aagggcgaaaagggggctgcaggctcccccgggctgctcagcctcctggggcagaaggga
gaaaaaggcgacgctggcaactcctttggagggggcagaggggagcccggccccccaggg
ctacctgggcccccaggcccaaagggagaagctggtgttgatggccaggccggcccccca
ggacggcaaggagacaagggtgagcccggagcagccggagaacagggaccggctggcccc
aagggcagcaagggggaaccaggcaaagaaatggtggactacaatgggaacatcaacgag
gctctccaggagatccgaacgctggccttgatgggaccccctggtcttcccgggcaaatc
ggcccacccggagccccggggatcccaggccagaagggggagattggacttccaggccct
ccaggacacgatggggaaaagggacctcgaggcaaaccaggcgacatgggccctcccggt
ccccaaggccccccaggaaaggctgggcccacaggaatgaagggtgaagacggacacgtg
gggagcccgggagaaaagggggagaaaggggagacggggcaagcaggccctccgggtcta
gacggcccaactggggagaaaggagaaccaggtggccaagggagacccggaacaacagga
ttgcccggcccgatcgggctcccgggatttacaggggagaaaggagagcccggggagaag
ggagacccaggagtggaggttcctgggcccccagggccagaggggcctcccggacctccg
ggactccaaggtgttcctggaccaaagggggaagcgggactggatggagcaaaaggagag
aagggtgtccagggagagaaaggagaccgagggccgctgggattacccggagcttcaggt
ttggacggcaggcctgggccaccgggtactccaggaccagtcggagttccaggcccagcg
ggaccaaagggcgagaggggcagcaaaggcgaccttgggatgacaggaccatcaggagcg
gctgggcttcctggtttacatggaccacccggggacaaaggaaaccggggacaccgaggt
tttaaaggagagaaaggggagccggggttaccagggctggacggactggatgccccgtgc
ccattgggcgaagatggcttaccagtccagggctgttggaacaagtga
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