Acanthopagrus latus (yellowfin seabream): 119010375
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Entry
119010375 CDS
T08233
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat04510
Focal adhesion
alat04512
ECM-receptor interaction
alat04810
Regulation of actin cytoskeleton
alat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
119010375 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119010375 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
119010375 (itgb4)
04810 Regulation of actin cytoskeleton
119010375 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
alat04147
]
119010375 (itgb4)
04515 Cell adhesion molecules [BR:
alat04515
]
119010375 (itgb4)
04090 CD molecules [BR:
alat04090
]
119010375 (itgb4)
Exosome [BR:
alat04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119010375 (itgb4)
Exosomal proteins of bladder cancer cells
119010375 (itgb4)
Cell adhesion molecules [BR:
alat04515
]
Integrins
Integrin beta subunits
119010375 (itgb4)
CD molecules [BR:
alat04090
]
Proteins
119010375 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
I-set
Motif
Other DBs
NCBI-GeneID:
119010375
NCBI-ProteinID:
XP_036938364
EnsemblRapid:
ENSALTG00010016634
LinkDB
All DBs
Position
20:4817326..4842420
Genome browser
AA seq
1943 aa
AA seq
DB search
MGRWTLHLSVGLGLLAVLLTCCYAEANYCLASKAKSCTECLQTGIGCAYCPDENFDGPRC
DLEKNIIARGCGAAALITAQSSKVINSEEKINVALQKSQVSPQRVTMSFLPGEEKLVNVE
VFAPTKGPLDLYILMDFSNSMADDLDNLKRMGNELASLVENLSDDYTIGFGKFVDKVIEP
QTDMRPSKLSQPWPNSDPPFSFQNVIKLTSELSDFTNKLQKERISGNLDAPEGGFDAILQ
AAVCRDKIGWRDHSTHLLVFSTESAFHYEADGANVLSGILPRNDEQCHLDADDKYTEDIH
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTYYKKLQEYFPIAEVGLLQEDSSNILQVMDS
AFKSIRSKMSIRAEEKPKAFETQFLSTSGKVAQYGDFNFRPGTIGKFMMKLTAQRLNGEQ
PVCQMSPDEKAGTMKVKPTTFNAGVNVEASVLCPVCECEKTPLPRAARCNGNGDLVCGKC
QCYGDWLGSFCNCSLADSVKSTSQCIAPGKTEPCSGRGDCMACGTCVCYNPEQFEGPYCQ
YDKTQCPRYGGFLCNDRGSCVMGQCACAEGWEGTACECPKSNQTCVDSKGGVCNGRGTCV
CGRCNCQSSGLELTSTCEPNFLAQLEVCEATRSCVQCQTWKTGEKKEDEKCKECPFQSYT
VTELKESDKVLDSCSFRDEDDDCTYYYTVDSSRDPAVKGMDVQVLEKKECPPASLLWLLP
LLLFLLLLLALLLLCCWKYCACCKSCWQSCLALLPCCRRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRAPTHPQALIKPNPKEIIQFPVSLRLNRLFSEN
LSRLESRDAEQLRKEVADNLNEVYKQIPGAQKVQKTTFRMQRNAGKRQDYTIMDTVLSAP
RASYPDIVKLTEKNVQSGNVRDLKVVPGYYTVATDREATGAVEFQEGVESVDVHVPLFVK
DEDDDKKQLQVEAIDVPLGIAEIGKRLVNITIIKEHASSVFSFLQPAYTYSRQDGVAKIP
ISREIIEDGHTQVTYRTRDLTAKDKKDYVTVDGDLTYVPGETQKIVPVRLLELGEKDGLL
EDKQVKQFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFKKGTQNFTTSDPTYTIPV
VRTRNHDSPATVKWRTKKAQRFELSAPLKFGPGETEKNIVIDPKSHPGPIQPETFQLELF
DPSSNASVGERKTTLVSVTDGITKSPEIAQMQEMGFIDRKASSPSGYLPAPGYPKAKATG
PRSIHLNWDPPPGNPMGYKVKYWIFGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGY
NAMGDGYDTDVATCQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTP
IDDEMKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAKNSVGWGPFRDATINLASQ
PARPLSIPIIPDVPIVDAEAGDEYDSYLMYSNEVMKSPTGSKTPSVSGDDYTMNGKWDQN
FLFPGGSGTRNMSASSSPMSTLSSNYRGAGGSFTTETTTTYMTGPGGSRRQDMVGGVHTS
EVIMRKRSENRGYADENIRDSIVMGEVSSKFPDLSGFGYTGMQSSSHSQFSYGLPQAPRG
RSQSSDINEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDIMGY
CVLYQLLNGGEMKRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGPEREGVITIES
AVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWDKPRKPNGDILGYVVTCEQ
LHGGGDVRSFQVNGDSTETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGS
ALSQYNSQSLVRREVFQMPTEVSTRTNVSHTMLNDPYFSDGMMMTTTSQHTETSGMMTQI
TKEVVQRSVMGGTTVTKKMFYES
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgctacatctctcagtggggctcgggcttctagccgtcctgctgacc
tgctgttatgctgaagcgaactactgcttggcttccaaggccaagagctgcacagaatgc
ctccagactgggataggctgtgcctactgccctgatgagaactttgacggccctcgctgt
gacctggaaaagaatattattgctcgtggctgcggcgccgcggccttaatcacagctcag
agctccaaggtgataaacagtgaggaaaaaatcaacgtggcacttcagaagtctcaagtg
tctccgcagagggtgaccatgtccttcctgccaggagaggagaagctggtgaatgtggag
gtgttcgctccaaccaaaggccccctggacctgtatattcttatggacttctccaactcc
atggctgacgatctggacaacttgaagaggatgggcaacgagctggcctccctggtggag
aacctgtcagacgactacaccatcgggttcggaaagtttgtggacaaggtgatcgagccc
cagactgacatgagaccctccaaactcagccagccctggcccaacagcgaccctccgttc
tccttccagaacgtcatcaagctgaccagcgaattaagtgacttcaccaacaagctccag
aaggagagaatatctggcaacctggacgctccggaagggggtttcgatgctatattgcag
gctgccgtttgtcgggataagatcggctggcgcgaccacagcacgcatctcctggttttc
tccaccgagtcggcctttcactacgaggctgacggcgcgaacgtgctgtccggcatcctg
ccgcgcaacgacgaacagtgccacctggacgcagatgacaaatacacagaggatatacac
caggattacccttccatacccacgctggtccgcctgctgggcaaacacaacatcattccc
atctttgcggtcaccaaccactcctacacatactataagaaactccaagaatattttccc
atcgctgaggttggtctgctgcaagaggactcatccaatatcctgcaagtcatggactct
gccttcaagagtatccgttccaagatgagcattcgtgcggaggaaaaacccaaggctttc
gagacacagttcttgagcaccagtggaaaagtggctcaatacggggattttaatttcaga
cctggaacaataggcaagttcatgatgaagctcacagctcagcgcctgaatggtgagcag
cctgtctgtcagatgagtccagatgaaaaagcagggacgatgaaagtcaagcctacgacc
tttaacgccggcgtcaacgttgaggcttcggttctgtgtccagtctgcgaatgtgagaag
acgcccctccccagagcagcgagatgcaatggcaacggagacctggtgtgcgggaagtgt
cagtgctatggtgactggctgggttcattctgtaactgctcattagctgattcagtcaag
tccaccagccagtgtattgctccgggcaagacggagccctgctcaggccgtggagactgc
atggcgtgtggaacctgtgtgtgctacaaccccgagcagttcgaagggccctactgccag
tacgacaagacccagtgtccaagatacggaggcttcctctgcaacgaccgtggctcttgt
gttatgggccagtgtgcatgcgctgagggctgggagggcacagcctgtgagtgtcccaag
agcaaccagacctgcgtggacagcaagggcggcgtctgcaacggtcgagggacatgtgtc
tgcggccgctgtaactgtcaaagctctggtctggagttgacttcaacctgtgagccaaat
ttcctggcccagctggaagtgtgcgaggccacaaggagttgtgttcagtgtcagacctgg
aagacaggagagaaaaaagaggacgaaaagtgcaaagagtgccccttccaaagttacacg
gtgacggagctcaaagaatcggacaaggtgctggactcatgcagtttccgtgacgaagat
gacgactgcacgtactactacactgtcgacagctctcgagatccggcagttaaaggcatg
gacgttcaggtgctggaaaagaaagaatgtccccctgcgagcctcctgtggctgctccca
ctcctcctgttcctcctcttgctgctggcactcctgctgctctgctgctggaaatactgc
gcctgctgcaaatcctgctggcagagctgcctggccctgctaccttgctgtaggagaggt
cgcatggtgggcttcaaggaggatgagtatttgctccgccagtccctgctcacctcggac
cacctggacacgccgatggtgaggaccggcccgcccaaaggaaccgatgtggttcgctgg
aaggtcacggacaacgtgcaccgggcccccacacacccccaggctctgataaagcccaac
cctaaagaaattatccagttcccggtctccctcaggctgaacaggctgttctctgagaat
ctgtcccgccttgaatccagagacgccgagcagctccgcaaggaagtggccgataatctc
aatgaggtgtacaagcagattcccggagcacagaaggtgcaaaaaaccacgttcagaatg
caaaggaatgctgggaaaaggcaggactacaccattatggacactgtcttgtccgctcct
cgtgccagctaccctgatatagtcaaactcacggagaaaaacgtccagtctggaaacgta
cgtgacctcaaagtggtgcccggctactacactgtggctacagaccgagaggctacggga
gccgtagagttccaagaaggtgtggagtcagtagacgttcacgtgccgctcttcgtcaag
gacgaagacgacgacaagaaacagctgcaggtggaggccatcgacgtgccgctgggcatc
gctgagattggaaaacgcttggtcaacatcaccatcatcaaagagcacgcctccagcgtg
ttctcattcctccagccagcctacacctacagcaggcaggacggggtggccaaaatccct
atcagcagagagatcattgaagatggacacacacaggtcacctaccgcacacgggacctc
acagccaaggataagaaggactatgtgactgtggacggagacctgacttatgttcctggt
gagacccagaaaatagtgccggttcgtctgcttgagctgggcgagaaagatggcctcctg
gaagacaaacaggtcaaacagtttgtcatggatctcagtaacccacggcagggcgcaaag
ttgggacgctatccgagaaccacagttaccatcacagaccaaccagagcccagtgtgatg
atgttcaaaaagggcacccagaacttcaccacgtctgacccaacctacaccatcccagtc
gtccgcactcgcaatcatgacagccccgccacagtgaaatggcgcaccaagaaggcccag
cgctttgagctgtccgccccactaaagtttggccctggggagacagagaagaacatagtg
atcgacccgaagtctcatcccggcccaatccagcctgagaccttccagctggaactgttt
gacccaagtagcaacgcctctgttggagagaggaagaccaccctcgtcagtgtcactgat
ggaattacgaaatctccagagattgcccagatgcaggaaatgggcttcatagaccggaaa
gcgtcttctcccagtggctaccttcctgccccaggatacccgaaggccaaagccactgga
cccagaagcatccacctcaactgggaccctccacctggtaatcccatggggtacaaggtc
aagtactggatcttcggtgacccagagaaggatgcccaggtcttagatgtgaagactcct
caagccgagttgaccaacctgtacccctattgtgactacgaaatgcgagtgtgcggctac
aatgcaatgggagacggctacgatacggatgttgccacctgtcaaacactggaggatgtt
cctggtgaacctggacgtctggccttcaacgtcatcagcccaactgttactcaggtcagc
tgggcagagcctgcggagaccaacggcaacatcacagcctacgaggtcatctacacaccc
atcgacgatgaaatgaagccggtgggggctgccaagaaagttaagattgacaaccccaag
aagcgaatgctgttgatcgagaacctccagagcgcacagacctaccaatacaaggttcgt
gccaagaacagcgtgggctggggccccttcagagatgccaccatcaatctggcgtcacag
cctgccagacctctgtcaattcctatcattccagatgtccctattgtggacgcagaggcg
ggagacgagtacgacagctacttgatgtacagcaatgaggtgatgaagtcacctacaggc
tccaagacacccagcgtctctggtgatgattacacgatgaacgggaagtgggatcagaac
ttcctcttcccagggggatcagggacgcgcaacatgtcagcatcgtcctctcccatgtcc
actctgagctccaactacagaggggcgggcggctcatttaccacggaaacaaccaccacc
tacatgacggggccgggaggctctcgtagacaggacatggttgggggagtgcacacctca
gaagtcatcatgaggaagcgctcagagaacaggggttacgcagatgaaaacatccgggac
tctatcgtcatgggagaggtgtcgagcaagttcccagatctaagtgggttcggctacact
gggatgcagagcagctctcacagccagttcagctacggcctgcctcaggctccgaggggc
aggagccagtcttcagacatcaacgaagccctgtacaatctggacagggtgctccaagat
gctcgactctcccccggtgttccagacacccccagcagactggtgttttctgctctggga
cccaccgcactcaaagtcagctggcaggagccccactgtgagaaggacatcatgggctac
tgcgttctctaccagctgctcaacggaggcgagatgaagcgcatcaatgtaacaaacccc
gcggagaactctgtgatcattcaggacctgctgcccaaccattcctacctattcaaggtg
aaggctcagagccaggagggctggggtccagagagggagggagtcatcaccatcgagtcc
gctgtcgaccctaagagtcccctcagccccatgccaggctcaccatttaccctgagcacc
cccagtgcccccggccccctggtcttcaccgcactcagtcctgattccctgcagctcagc
tgggataaacctcgtaaacccaacggagacatcctgggctatgtagtcacatgtgaacag
ttgcatggtggaggagacgtgcgttccttccaggtgaatggcgatagcaccgagaccagt
ctgaccgtcccaaacctgaccgagaatgttccctacaagtttaaagtccaggctcgaacc
acgcagggcttcggccccgagagggagggcatcatcaccatcgagtctcaggatggaagt
gctttgtctcagtacaacagccagtcactggtgaggagagaggttttccaaatgccaacc
gaggtcagcacgcgaaccaacgtctcccacacgatgctcaatgacccctatttctcagat
gggatgatgatgacaacgacctcgcagcacacagagaccagtggcatgatgacccagatc
accaaggaagtggttcagaggagcgtcatgggaggaaccactgtcacaaagaagatgttc
tacgaatcttaa
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integrated database retrieval system
