Acanthopagrus latus (yellowfin seabream): 119013971
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Entry
119013971 CDS
T08233
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alat03016
]
119013971 (tsen54)
Transfer RNA biogenesis [BR:
alat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
119013971 (tsen54)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
119013971
NCBI-ProteinID:
XP_036944803
EnsemblRapid:
ENSALTG00010006371
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All DBs
Position
23:complement(23594285..23602568)
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AA seq
521 aa
AA seq
DB search
MYRTGQRCPVNMADHNKSDAEGFFGEVLSPSELFAARSRSHKIPVRGQKDFFPNESDEQR
QRLEQSLNEHWSLISEERVERLGNLVKATWLPSEQIVELQSPAGKFWQTMGFSASGKQHL
LPEEALYLMECGNLQVFYQKLPLSIQDGYEKFLSSSTVSLQQYQVFAHLKRLGYVVHRFD
PSLEPSSYARQLNLLQSRDRAVKQLKRKRSASPTAASSHTEVQETPTADRMEEDECGPER
GEDKKPPESSLTASAGTAAAASSDEGGGRTWWMTDDLGERSDHQPASGRSRWHFGSIPFP
DLGSRGSSSSCLVPPDPSLLPGSVAVGVCDIAPWRRRINQREVKMSSKDRRREEDKRRRR
WDINRDREVRRCRNWAEYRELLARREGRRKGRPAHLWNREVTPLHDPRQPIPTKELLDKL
SVIKSTHLLEDASSIKASDEWRICFNVYQPDTVADFKKSNPGKPYSRMCVCSFDGPVPDL
RAIKLLTSQSGDVPVVLAVVDHGDISFYTFKDFHLPTDVFP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtacaggacaggacagcgctgcccggtaaacatggcggaccataacaagagcgacgcc
gaggggttcttcggtgaagtgttaagcccgtctgagctgtttgcagcccggtccaggagt
cacaagatcccggtccgaggtcagaaggacttcttccccaatgagtcagacgagcaaaga
cagcgactggagcagagtctcaacgaacactggagcctcatatccgaggagagagtggag
agattaggaaacctggtgaaggccacatggcttccaagtgagcagatagtggagcttcag
tctcctgcagggaagttctggcagacgatgggcttttctgccagcggcaagcagcatctc
ctccctgaagaggctctgtacctgatggagtgtgggaacctgcaggtgttctaccagaag
ctgccgctgtccatccaggacggctacgagaagtttctgtcctcgagcacagtgagcctc
cagcagtatcaggtgttcgcacatctgaagaggctcggctacgtggtgcacagattcgat
cccagtttggagccgtcgtcctacgcgaggcagctgaacctgctgcagtcacgtgaccgg
gcggtgaaacagctgaagaggaagcgcagcgccagtcccacggcagcatccagtcataca
gaagtacaagaaacacccacagctgacagaatggaggaagatgaatgtggccctgaacgt
ggtgaggacaaaaaacctcctgaatcttccctgacggcgtctgcagggactgccgctgca
gcttcctcggatgaaggcgggggcaggacctggtggatgacggacgatctcggggagcga
tcggatcaccagcccgcctctggtcgctcacgctggcacttcggctccatccctttccct
gacctgggctccagggggagctcctccagctgcctggtccctccagacccctctctgctc
cctgggtctgtcgctgtgggagtctgtgacatcgccccctggaggcggaggataaaccag
cgggaggtgaagatgtcctcaaaggatcggaggagggaggaggacaagcgaaggcgccgg
tgggacatcaacagagacagagaggttcggcgctgcagaaactgggcggagtatcgggag
ctcctggcgaggcgggaggggagacgtaaaggccgaccagctcacctgtggaacagagag
gtcactcctctccatgaccccagacaaccaatccccactaaggagctgctggataaactg
agtgtgattaaatcgacacatctgctggaggacgcatccagtataaaagcttcagacgag
tggaggatttgtttcaatgtttaccagccggatacggtggccgacttcaagaagagcaac
ccggggaaaccttactcccgcatgtgtgtgtgcagtttcgacggtcccgtccccgacctg
cgagccatcaagctcctgacctcccagagtggagacgtcccggtggtgttggcggtggtc
gaccacggagacatctccttctacacctttaaagacttccacctgcccactgacgtgttc
ccctga
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