Altererythrobacter sp. B11: AEB_P3357
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Entry
AEB_P3357 CDS
T05671
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
alb
Altererythrobacter sp. B11
Brite
KEGG Orthology (KO) [BR:
alb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alb03021
]
AEB_P3357
Transcription machinery [BR:
alb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AEB_P3357
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
DUF5817
Motif
Other DBs
NCBI-ProteinID:
BBC74225
UniProt:
A0A2Z5Z1A9
LinkDB
All DBs
Position
complement(3594831..3595751)
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AA seq
306 aa
AA seq
DB search
MGKTMSEKKTKSLSVPALGGEQSLNRYLAEIKKFPVLTAEQEYMLAKRYQEHEDPDAAAQ
LVTSHLRLVAKIAMGYRGYGLPVSDLISEGNVGLMQGVKKFEPDRGFRLATYAMWWIKAS
IQEFILRSWSLVKMGTTAAQKKLFFNLRRMKKNLEAYEDSDLHPDDVAKIATDLGVPEQE
VVNMNRRMMMGGDASLNVSMRGEEEGASQWQDWLTDDRPLQDSVVAEAEEAEMRHGMLLE
AMDSLNDREKHILSERRLSDDPQTLEELSQVYDVSRERIRQIEVRAFEKLQKAMQRIAGE
KLLPAA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttgggtaagacgatgagcgagaagaagaccaagtcactatcggtcccggcactcggcggt
gagcagagcctcaaccgctatctggcggagatcaagaagtttcccgtgctgaccgccgag
caggaatacatgctcgccaagcggtatcaggagcacgaggatccggacgcggctgcgcag
ctggtgaccagccatctgcggctcgtggccaagatcgcgatgggttatcgcggctatggc
ctgccggtgagcgatctgatctccgaaggcaatgtgggcctgatgcagggcgtgaagaag
ttcgagcccgatcgcggtttccgcctcgcgacctacgccatgtggtggatcaaggccagc
attcaggagtttatcctgcgcagttggtcgctcgtgaagatgggcaccaccgcggcgcag
aagaagctgttcttcaacctccgccggatgaagaagaacctcgaagcttacgaggacagc
gatctgcatcccgatgatgtggcgaagatcgccaccgatctcggcgtgcccgagcaggaa
gtcgtcaacatgaaccgccgcatgatgatggggggcgatgcgtcgctcaacgtctccatg
cgcggagaagaggaaggcgccagccagtggcaggactggttgaccgatgatcgtccgctg
caggacagcgtggtggcagaggccgaagaggccgagatgcgccacggcatgctgctggag
gcgatggacagcctgaacgatcgcgagaagcacattctcagcgaacggcgcctgagtgac
gatccgcagacgcttgaagagctgagccaggtctatgacgtgtcgcgcgagcgcattcgt
cagattgaggttcgcgccttcgagaagctgcagaaggcgatgcagcgcatcgccggagag
aagctgctgccggcagcgtaa
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